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GT14812

CSHL Arabidopsis genetrap mutant lines

Original: GT14812

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14812

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 597885 [Map]; Strand: c
      • AT1G02730.1 - [+] show detail - cellulose synthase-like D5
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14812 - 3-prime edge
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAAGGACA 
    ATTGCCTCCA CCACTTGTGA TACAATCAAA GTAACAATCT CTACAGATTC
    GGAAACCACA CTCACATCTC CCGTGAACAA CTTTCTCATC ACAACCTTTT
    AACCAGCAGA TCTGACCTGA CTTCATCTCA CGCGACGATC TATCCATAGA
    ACAATCGATC ACATGACCAC GTGTCACCGA TTTAAACCCA CCGGTGAAAA
    TCGTCCCAGA GAGGAAACTT TTTTGATTCG AATTCCCTTT TAGCATCTCG
    TCTTCATCTC ACTCGACCAA AGNGAACACC GTCTGATGAT CCGGCGTAGG
    TGGGATATGA ACAGTATAGC TCAGAACGGA CTCTGAATTA GTCGGCTCCC
    CCGTTAGATC TTCCACAGAC ATAGAACAGT ATCTTC

AT1G02730.1

Model type
Protein coding
Short Description
cellulose synthase-like D5
Curator Summary
Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.
Computational Description
cellulose synthase-like D5 (CSLD5); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3375 Blast hits to 3003 proteins in 709 species: Archae - 13; Bacteria - 1269; Metazoa - 102; Fungi - 19; Plants - 1879; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink).
Link
InterPro Scan - TAIR