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GT14821

CSHL Arabidopsis genetrap mutant lines

Original: GT14821

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14821

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT14821 - 3-prime edge
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAATGT 
    CTAACTTATT TCCAATAAGC TTTTGTATGA ATTTGTAATC TATTTTCTTT
    GGATTGTAGG TTTCATTTTC CACTTCGTGG CTCCGTTTGT AACAGTTTCG
    GTTTTATAAT GAAAGGTGTG TGTTTAAGAA AAAAAAAAAA AAAAAAAAAA
    AAAAAAACCT TTTTCCCCCA AAAAGGGGGA AAATTTTTTC AAAAAAAAAA
    AAATTTTTTT TTAATTTTCC AAAAAAAAAT GGGGAAAAAC CCAAAAAAAA
    AATTTTTTTC CCCCCCTTTT TGGGAAAAAA AAATTCAAAA TTTCCCCCCT
    GGGGCCCGGA AAAAAAATTT TTTTTTTTTG CGCACCCCCA AAAAAAACCC
    CGGGGGGAAA AAAAAAGTTC CCCCCCCCCA TTTTTCCTAA AAAATTTGGG
    AAAAAAAACC CCCCGAAAAA AAAAACCCGG GGGGGAAAAA AAACCCCCCC
    AAAAAAATTT TTTAAAAAAA CCATTTTTTT TTTAAAAAAA ACCCCCCCCC
    CTTCTGGAAA AGGGGGGAAA AAAGGTCCAA AAATTTCCCC CCCCCTGAAA
    AAAAAAAAAA AAAAAAAAAA A
  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT14821 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGT TCGTTTTCAT CCCTAATGTC 
    TAACTTATTT CCAATAAGCT TTTGTATGAA TTTGTAATCT ATTTTCTTTG
    GATTGTAGGT TTCATTTTCC ACTTCGTGGC TCCGTTTGTA ACAGTTTCGG
    TTTTATAATG AAAGGTGTGT GTTTAAGAAA AAAAAAAAAA AAAAAAAAAA
    AAAAAAGCTT TCCCCCCCAA AAAGGGGAAA AACTTTTCCA AAAAAAAAAA
    AATTTTTTTT AAATTTCCCA AAAAAAAAGG GGGGAAAACC CCAAAAAAAA
    ATTTTTTTCC CCCCCTTTTT GGGAAAAAAA AATTCAAAAT TTCCCCCCTG
    GGGCCCGAAA AAAAAAATTT TTTTTGGGCG CAAACACAAA AAAAAACCCC
    GGGGGGAAAA AAAAAGGCCC CCCCCCCAAT TTTCCCTTAA AAATTTGGGA
    AAAAAAACCC CCGGAAAAAA AAAACCCGGG GGGGAAAAAA AACCCCCCCC
    CAAAAATTTT TAAAAAAACC AAATTTTTTT TTAAAAAAAA CCCCCCCCCC
    CTTTGGAAAG GGGGGGGAAA AAGTTTCAAA AATTTCCCCC CCCCTGAAAA
    AAAAAAAAAA AAAAAAA
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 14094207 [Map]; Strand: w
      • AT1G37057.1 - [+] show detail - transposable element gene
        Distance: -99; Region: promoter
    Flanking Genome Sequence: GT14821 - 5-prime edge
    GTGTCTACCT CGACTTATTT CGGTTCGCGA AAAAGCTAAA GGCACTAAAA 
    CCGGTGATTA GAAACTTGGC TAAAGATAGA TTGGGAAATT TGGTAAAACA
    GGCAAAGGAA GCTCATGATG ATCTTTGCAT AAAGCAGCAG CTAAACCTAC
    AAAACCCTTC AGTTAGTGCG ATGGAGGAAG AAACAGAGGT TTATGATAGG
    TGGGAAAGAG TGACTTGTCT TGAAGAGAAG TTTCTAAAAC AGAAATCTAA
    GTTGCATTGG TTGGATGTGG GAGACAAAAA CAACAAGACT TTTCATAGAG
    CGGTCACATT AAGGGAAGCG CACAACTCGA TTAGGGAAAT TCAAAAACCG
    GATGGCTCAG TTACAAAAAA GAAAGAAGAA ATAAAAGAGG AAGCAGAACT
    ATTCTTTAGA GAATTTCTTC AATTGGTTCC ACATGACTAT GAGGAAATAT
    CCATTAGTGA TCTTCAGGAA TTTTTTTCTT ATCGATGCTC AGAGGATGAA
    AAAACAGAGA TGACTAGATC AGTAACAGAG GAGGAGATTA AGCGGGTACT
    CTTTGCAATG CCAAAAGATA AATCGCCAGG GCCAGATGGT TATACTGCAG
    AGTTTTATAA ATCGACATGG GATATCATTG GGAAGGAGTT TATTCTTGCG
    GTCCAATCTT TCTTTT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 14094200 [Map]; Strand: w
      • AT1G37057.1 - [+] show detail - transposable element gene
        Distance: -106; Region: promoter
    Flanking Genome Sequence: GT14821 - 5-prime edge
    CTTCTCCTGT GTCTACCTCG ACTTATTTCG GTTCGCGAAA AGCTAAAGGC 
    ACTAAAACCG GTGATTAGAA ACTTGGCTAA AGATAGATTG GGAAATTTGG
    TAAAACAGGC AAAGGAAGCT CATGATGATC TTTGCATAAA GCAGCAGCTA
    AACCTACAAA ACCCTTCAGT TAGTGCGATG GAGGAAGAAA CAGAGGTTTA
    TGATAGGTGG GAAAGAGTGA CTTGTCTTGA AGAGAAGTTT CTAAAACAGA
    AATCTAAGTT GCATTGGTTG GATGTGGGAG ACAAAAACAA CAAGACTTTT
    CCTAGAGCGG TCACATTAAG GGAAGCGCAC AACTCGATTA GGGAAATTCA
    AA

AT1G37057.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hAT-like transposase family (hobo/Ac/Tam3), has a 7.8e-25 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)
Link
InterPro Scan - TAIR