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Mutant Lines
GT14828

GT14828

CSHL Arabidopsis genetrap mutant lines

Original: GT14828

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14828

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 1175504 [Map]; Strand: w
- AT4G02660.1 - [+] show detail - Beige/BEACH domain ;WD domain, G-beta repeat protein
  Distance: -1183; Region: intergenic
- AT4G02670.1 - [+] show detail - indeterminate(ID)-domain 12
  Distance: 686; Region: intergenic

ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
AATCATTTTC ATACTGTGAT GAATAGTCGC TATACCAATC ACAATTAATT 
TAGTGACAAA TCATTACAAT CTTATGGTTT TTTTTAATAG ACGGTTTAAT 
TACGTACCAC AAAATCAAAA GGAACTGAAA ACACATAAAG ATATGAGGGT 
GAGGAGGAAT CAAATAAAAA AGATATTATA TAGAAAACTA CGAGGAATAA 
TATAAAGTAG AAAAGATTAA AGAAACGAAT TAGGTCAAAG AGCTTGTTGA 
TGAGGACACG CATGAACATG CGAACACTTT AAAACCAAAA AACGAAAACA 
AAAACAAGAA CATGCGACCA CTAAAAAGTT AAAAAGATAG ATTAAAAGAA 
CATTGTTAAT GGTATCAATA TAGTTTCCTT TTATGTTTTT ACGAGCTCTT 
ATAGTCCCCA TTCTATACAA CTTTGTTTTG CTTTCCTTTT TTCTTTTGGC 
TTGTGATTGG AAATTGAAGG TTGGTATAAA ATGTACAATT CAGACATCTT 
ATATATCTCC AGAGTATCCT TTTGGTTTGG CTG

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 1175554 [Map]; Strand: w
  - AT4G02660.1 - [+] show detail - Beige/BEACH domain ;WD domain, G-beta repeat protein
    Distance: -1233; Region: intergenic
  - AT4G02670.1 - [+] show detail - indeterminate(ID)-domain 12
    Distance: 636; Region: intergenic
Flanking Genome Sequence: GT14828 - 5-prime edge
```
TCCTACTTTA TCCCTGAAAT GATACATACA TGTTAGTGTT CGTTACTAAT 
GCCATAGTGG CAACATAAAT GACCATCAAT AGTATAAGCT TCATGTCACT
```

AT4G02660.1

Model type: Protein coding
Short Description: Beige/BEACH domain ;WD domain, G-beta repeat protein
Computational Description: Beige/BEACH domain ;WD domain, G-beta repeat protein; FUNCTIONS IN: binding; INVOLVED IN: signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Beige/BEACH domain ;WD domain, G-beta repeat protein (TAIR:AT1G03060.1); Has 7684 Blast hits to 5756 proteins in 390 species: Archae - 8; Bacteria - 1306; Metazoa - 3489; Fungi - 1068; Plants - 719; Viruses - 0; Other Eukaryotes - 1094 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G02670.1

Model type: Protein coding
Short Description: indeterminate(ID)-domain 12
Computational Description: indeterminate(ID)-domain 12 (IDD12); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: shoot apex, embryo, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1); Has 45871 Blast hits to 18418 proteins in 241 species: Archae - 0; Bacteria - 0; Metazoa - 43560; Fungi - 264; Plants - 729; Viruses - 2; Other Eukaryotes - 1316 (source: NCBI BLink).
Link: InterPro Scan - TAIR