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GT14831

CSHL Arabidopsis genetrap mutant lines

Original: GT14831

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14831

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 172937 [Map]; Strand: c
      • AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14831 - 3-prime edge
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATT 
    GTCACACTTA TACTGTATTG ATGGAGTATC TTGTCGCCAC AGGTCAACTT
    CATTCTCTTG CACACTAAGT GTTTGTTAAA ATGCTTAGCT GAAAATCCAA
    AACTTTTGCT TTATGTAGAT GATTCTGGTA TCTGAATGTT TTGTAGCCTT
    GTTGATGATG ATGTGTTAGT TTCTTCGTTT GATTTTGCAG GAAAATGTGA
    GGAAGCCTTG GACATATTCT TTAAAATGCA AGAAATTGGT GTGCAGCCAG
    ATAAAGCAGC TTGCAATATT CTGATAGCGA AAGCCTTGAA ATTTGGGGAA
    ACATCTTTCA TGACTCGAGT TCTTGTGTAC ATGAAAGAAA ATGGAGTTGT
    CCTACGCTAT CCTATCTTTG TTGAAGCTTT AGAGACACTG AAAGCTGCAG
    GCGAAAGTGA TGATCTGTTA AGGGAAGTCA ACTCGCATAT TTCCGTTGAA
    TCGTTGTGCT CCAGTGACAT TGATGAGACT CCAACAGCGG AAGTTGATGA
    CACTAAGAAT TCAGATGATA GTAGAGTTAT CAGCTCCGTT CTCTTGATGA
    AGCAGAATCT GGTTGCAGTT GACATTTTAC TTAACCAGAT GAGAGATAGG
    AACATAAAGC TGGATTCTTT TGTTGTTTCA GCAATCATAG AAACAAACTG
    TGACCGTTGT AGAACAGAGG GGGCTTCGTT GGCTTTTGAT ACAGCTT

AT2G01390.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G01360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR