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GT14834

CSHL Arabidopsis genetrap mutant lines

Original: GT14834

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14834

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2586332 [Map]; Strand: c
      • AT3G08510.1 - [+] show detail - phospholipase C 2
        Distance: -481; Region: promoter
      • AT3G08510.2 - [+] show detail - phospholipase C 2
        Distance: -481; Region: promoter
      • AT3G08510.3 - [+] show detail - phospholipase C 2
        Distance: -481; Region: promoter
    Flanking Genome Sequence: GT14834 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTGTATGTTT TCTATTAGAA 
    TTATGTTTAT TACATGGAAT GATCCTTATG AGTTACTGAT TCTCCTTAAA 
    GTTCTTCAAT CTGCTTATCA TTTTGGTTTA ATTGATTATC TATAGTTAGT 
    GTCTGCGCTG GATGAGTTTT ATCCTGGTGA AGGTTGAACT TTTGATATTA 
    GAAATACCAA GTGAATTTGT ATGTCATCTA AGTATACTAA TAAAAACAAA 
    GTATGTTGGG TTGATTGAAT CTTTCTATCC AGAACGTTTT CTTAGTAATG 
    TAGCAGAAAT GTGTGTTTAC TGAGGGATGC AATTTTTAGT TCATGATGTT 
    CAGATGACTA TTGGTACTTA GGTTTTTATG TGTACATGTG AAATAAACCT 
    ACCCTAAGAT TTCATTATTA TTTCATGAAA ATGAGATTCA CGTTGCATCT 
    ATGTCTTTCT GATGCTGATG AATGATGATG ATTGTTCTGA GGTCAACCAA 
    ATTCTCATGA AGGATTTATT TAGTCCTTCT CGATATTAAT TGTTTCATAT 
    ATGAATAACA ACAAGGTGAA ACTGATCAAC GGTTTAATAA ATCGAAAGTC 
    GAATGGAATG AAATGCTGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2586234 [Map]; Strand: c
      • AT3G08510.1 - [+] show detail - phospholipase C 2
        Distance: -383; Region: promoter
      • AT3G08510.2 - [+] show detail - phospholipase C 2
        Distance: -383; Region: promoter
      • AT3G08510.3 - [+] show detail - phospholipase C 2
        Distance: -383; Region: promoter
    Flanking Genome Sequence: GT14834 - 5-prime edge 
    TTTGGTCCAA CAAAACATTC AAATTGAAAA TTGCAAAACC AACAAAACTC 
    ACATAAGAGT TGGTTCTGAA AAGAAGAAAG ACAAAACAAA CTCCCGAATC 
    TACTTAGATC GCTGTCTCAT CTTTCGTCTC TTCCTCTTCA ATCTCCTCAT 
    ACGCTTCTTC TTCCACTGCA ACACACAAAC ACACAAACCA TAAAGATCCT 
    ACACACTACT TCAATTTCTC ATCACTAAAA AATCCATTAA ACAATCAAAA 
    CCCATTACTA ACCTTGGCTC TCATGCTGAT TTCGCAGAAG CTGTCTCCTT 
    CGTTCCTCTG ATTATTTGTT TAGCTTTACA GGATGAGGAG CGGCGGAGAT 
    GAATAGAAAG ATTTTGTAGC TTACGCTCTT ATTCCTCCTT TAAACAACAA 
    CAAAACCCTA GTAACTAACT TAATGGGCTT TATTATTTCA AAAGCCCAAT 
    AAAACCCAAA TGGATAAGAA TTTGCCAGAG GGGATATTCG CACAGAGAGA 
    GAAAGAAGAT CTTTTTCCGA CAAGGTTCAA GATCGATTAA ACATTACATG 
    GAGGAGATTC ACTAGAAAGA AAGGAAAAAA ATCTCTTTGT CTTTGCAGAT 
    GCGACACGCA AAACGACGAT TCTGATCTCG CTTGTCTGAT TTCAAAAACA 
    ATGAGAAGAT AGTTCTGATT ATATAACACA CAAACCCTAC TTCATTCCTT 
    CATCATCGTC TCCAATCATT ACCCAAAGAT CCGTCTTTTT

AT3G08510.1

Model type
Protein coding
Short Description
phospholipase C 2
Curator Summary
Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol.
Computational Description
phospholipase C 2 (PLC2); FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT3G55940.1); Has 2471 Blast hits to 1979 proteins in 261 species: Archae - 0; Bacteria - 0; Metazoa - 1631; Fungi - 374; Plants - 251; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G08510.2

Model type
Protein coding
Short Description
phospholipase C 2
Curator Summary
Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol.
Computational Description
phospholipase C 2 (PLC2); FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT3G55940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G08510.3

Model type
Protein coding
Short Description
phospholipase C 2
Curator Summary
Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol.
Computational Description
phospholipase C 2; FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Phosphoinositide-specific phospholipase C family protein (TAIR:AT3G55940.1); Has 2455 Blast hits to 1965 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 1631; Fungi - 365; Plants - 250; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).
Link
InterPro Scan - TAIR