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GT14839

CSHL Arabidopsis genetrap mutant lines

Original: GT14839

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14839

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 115490 [Map]; Strand: w
      • AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT14839 - 3-prime edge
    CGGTAGAGGT ATTTACCGAC CGTTTCCGAC CGTTTTCATC CCTATATATA 
    GTCAAACTGG TTATCTCTAC TCACTGATCC ACATTCCAAA AGCAAACCAC
    GTTTCTTGAA GAGCCAGAGA CAGAACACAA CTCACCGTCA CCGAGGTTGT
    TCATCTCACT CGA
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 115568 [Map]; Strand: w
      • AT4G00260.1 - [+] show detail - Transcriptional factor B3 family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT14839 - 5-prime edge
    ATTCTATTAT TTTTCAGAGA AAAAGAAAAG TGAAGGAGAA TCCAAATGGA 
    GAAGCAGAGT CTTCTTCACG AGATCCCTCT TGTTTTGTGG CTAATGTTGC
    GCCTTCGAGT CTACGTTATG ACTTGATGGT ATTTGACTCT TAAGAACCCG
    AAAAGAAACT CTCATTCTAG GGTCTGAACT CATGTTGTAT TCTAATGAAT
    TTTTCAGAGA TTTCCAAGGG GTTTTGTGAG GGATAATGGT GTAGTCGGAT
    CTGGAGAGAT TGTTCTGATG AATGAAAAGG GCAGATCATG GAATTTTAAC
    TTGAGACAAA AGCCATCAAA CGGAACAGTT TATGTTAGAG GAGGGTGGGT
    GAGTTTTTGT GATGCCAATG GGCTTAAAGC TGGCGATAAC TACACTTTCA
    AACTGATCAA AAGAGCAGGA ACTCTTGTTC TACGTTTGTT ACCCAATGAG
    CCAAAAGAGG AAGCTAATGA AGTGTCTCTT CCCGAAGAAC CGGAAAGCGA
    TGCAGAGCGC AACCTTGGTG AGTTCTGTTC TTTCTTTCTC TAACTCTGCC
    CATGATACTT GACATTCAAG AAACGTGCTC ATATGGATTT TATTTCTTTC
    TTTTTTTCAG AAAAGATTCA AAGGAAGGAG AAAGTGAAGA AGAAGTAACA
    AGAGAGGCAG AGTCTTCTT

AT4G00260.1

Model type
Protein coding
Short Description
Transcriptional factor B3 family protein
Computational Description
maternal effect embryo arrest 45 (MEE45); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, embryo development ending in seed dormancy; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT2G24645.1); Has 539 Blast hits to 263 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR