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GT14846

CSHL Arabidopsis genetrap mutant lines

Original: GT14846

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14846

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10024826 [Map]; Strand: c
      • AT5G28010.1 - [+] show detail - Polyketide cyclase/dehydrase and lipid transport superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14846 - 3-prime edge 
    TATTTTACCG ACCGTTACTT TCCGTTTTCA TCCCTAAATA TGGCAGAGAC 
    GGTGGAGGTG ACTACGATGC CCAAGTCTTC TCTTTTAGGA GAGCTTGAGG 
    TAGAAGTTGA GATCAAAGCT CCCGCGGCGA TATTCTACCA CATCTATGCA 
    GGAAGACCAC ACCATGTTGC TAAAGCCACT CCTCGCAACG TGCAATCATG 
    TGATCTCCAT GATGGGGAAT GGGGCACCGT AGGCAGCATC GTCTATTGGA 
    ACTACGTTCA TGGTAATTTA TATGACTTCG AAAATATTTT TTGAATATTG 
    AAGATTTGAT TGGTGAATGT TTTGGTTGTA GAGGGGCAAG CAAAGGTTGC 
    AAAAGAGAGG ATTGAATTAG TAGAGCCAGA GAAGAAACTG ATCAAGTTTA 
    GGGTCATTGA AGGAGATGTT ATGGCCGAGT ACAAGAGTTT CTTGATCACG 
    ATTCAGGTGA CCCCGAAGGA AGGAGGGATT GGAAGTGTTG TGAAATGGCA 
    CATTGAGTAA TGAGAAGATT GAATGAGAAC GTG

AT5G28010.1

Model type
Protein coding
Short Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Computational Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G28000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR