Home
Mutant Lines
GT14870

GT14870

CSHL Arabidopsis genetrap mutant lines

Original: GT14870

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14870

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 56187 [Map]; Strand: c
  - AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
    Distance: -2738; Region: intergenic
  - AT4G00150.1 - [+] show detail - GRAS family transcription factor
    Distance: 1012; Region: intergenic
Flanking Genome Sequence: GT14870 - 3-prime edge
```
GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACACATG 
TGATATATGA TGAGTGACTA CGTCGGCGCG TCTTAGTGGA GCCGAGCGCG 
CGTGACCCAG GCCTTGCTTG TTGCGTGACT AGCTTATGTT CACGTAGGCA 
TGTTACAAAT CAATACACAC ATTAGTTGAC AAAAACTGAC CGTTGATTTG 
GTTGTTCATC TCACTCGACC
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 9125343 [Map]; Strand: w
- AT2G21320.1 - [+] show detail - B-box zinc finger family protein
  Distance: -920; Region: promoter

TTCCATCCTA CTTTCTCCCT GCATGTGTGG AAGTATTGCC TAAAGTGTTA 
TAAAGACTCT AATCCAAAGA GAAGGTCTCA GCTTGTGAAA GAAACGAAGT 
CACGAGAGGC GCACGTGCTT TGTCATACAG CTCATCAAGG CTAGAGACGT 
AATTAACCTC TTGCCAATGG TTCAACCATT TTGTCTCTTT GTCTCTGCAT 
TTGAAACAGA GTACGGAAGA AGAGAGAAGA GCGTGGCGGT GAGTAGAGTT 
GTATAAAGGA GAAGATAAGT GAGACATTAG GGTTAAGAGA GTAAGTGCAA 
GAGAGGCAGC TGAAAGTTTA TTCAGTCTTG TTTCTAAGGG TTTGTGTAAC 
CAAGGCTTTC TAGTGGATTT CCGGGTAATC TCGGTCCAGA CGTAGCGTTC 
ATCACTGAAC GTGAACTGGG TTAACATTTG CTTGTGTCTG TTTTACTTTC 
TTTGTCTAAA CACACGAGTG ATCGAACAAA GAGAGATTTA GTGAGAGCTT 
CCGCATAAAA CAGTTAAAGA TTCAAGTTTT TTA

AT2G21320.1

Model type: Protein coding
Short Description: B-box zinc finger family protein
Computational Description: B-box zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger family protein (TAIR:AT4G38960.1); Has 1943 Blast hits to 1369 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 1819; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00140.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR