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GT14875

CSHL Arabidopsis genetrap mutant lines

Original: GT14875

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14875

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25051082 [Map]; Strand: c
      • AT1G67090.2 - [+] show detail - ribulose bisphosphate carboxylase small chain 1A
        Distance: -1658; Region: intergenic
      • AT1G67100.1 - [+] show detail - LOB domain-containing protein 40
        Distance: -2652; Region: intergenic
    Flanking Genome Sequence: GT14875 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TACCCACATA 
    TCATAATTAG ATGTTTTTAA TATCCTCTTT GAGACTCCTT CAAACACTTG 
    ATATCTTGAA CAATAAGAAT TTGTTGACCA ATAATCCTAT ATTACAAGAT 
    GCCTTCTATT ATAACTATGA TAACATTCGA AGCTCAAGCT CCTCGTAAGG 
    TAAAGAGCCC ACAAAATTCC GAAAACCATG GAAAACGCGA GTCCCTGGGT 
    TTGCATTATA TTTTCTATAT TTGTTTTTCT TTTCTCCTAA AATTATGGAA 
    GTGATTGGAA GATACAAGAG GTTTTGTCCT AACAATTTAA ACTCGACGAC 
    TAAAAACGTA GGATGACGCG ATAC

AT1G67090.2

Model type
Protein coding
Short Description
ribulose bisphosphate carboxylase small chain 1A
Computational Description
ribulose bisphosphate carboxylase small chain 1A (RBCS1A); FUNCTIONS IN: ribulose-bisphosphate carboxylase activity, copper ion binding; INVOLVED IN: carbon fixation, response to cold, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G67100.1

Model type
Protein coding
Short Description
LOB domain-containing protein 40
Computational Description
LOB domain-containing protein 40 (LBD40); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 41 (TAIR:AT3G02550.1); Has 635 Blast hits to 634 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 635; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR