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GT14876

CSHL Arabidopsis genetrap mutant lines

Original: GT14876

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14876

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3873176 [Map]; Strand: w
      • AT3G12143.1 - [+] show detail - pseudogene, similar to polygalacturonase-inhibitor protein, blastp match of 5...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT14876 - 5-prime edge 
    CTGATGTTAT CAGGAATCGG ACCGGAGAAA TTGGTGTGTT TTATAAAGAG 
    GAGGTTGAGA CTCTTGAGCA TGGTGATCGC GGGTGGGATA TTTCCGGAGA 
    TTGTACTGGC GGAAAGGTAG AGGTAGGTGA CGCGGCCGTC AGTGCATTCC 
    ACTCCGATCC AGCCAGTACA ACAGCCGGTT CGGGGGTTCC AGGAGGAGAG 
    GTAGGGAGGG TTGTTAAGGG ACTTCTTGAT TTGAAGGAGG GCATTATTGT 
    CATTTGGGTT GCAACTGTAG GAAGATGGGA GAGATAAAGA TGATGGAGAA 
    GAAGATAGAG AGATGAAGAA GGAGATTCAT TGTGATCATG GGTGTGGTTA 
    CTTTGAGCAG TTAAACAACT TGTGATCTAT ATAACAGAGA CTTCAATGGA 
    ACACAGCTGT GTAATGTTAC TGATTTTGTA CAGTTTGGGT TCTACACTAC 
    TCCTAAAAGT TCTAACGTAC AATAACCTTT TTATAACATA AATTC

AT3G12143.1

Model type
Pseudogene
Computational Description
pseudogene, similar to polygalacturonase-inhibitor protein, blastp match of 53% identity and 7.5e-64 P-value to GP|18148923|dbj|BAB83520.1||AB064545 polygalacturonase-inhibitor protein {Citrus sp. cv. Sainumphung}
Link
InterPro Scan - TAIR