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GT14885

CSHL Arabidopsis genetrap mutant lines

Original: GT14885

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14885

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 404897 [Map]; Strand: w
      • AT2G01890.2 - [+] show detail - purple acid phosphatase 8
        Distance: -5689; Region: intergenic
      • AT2G01900.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: -1021; Region: intergenic
    Flanking Genome Sequence: GT14885 - 3-prime edge
    GCAACTCGCA TATGCACTAA CCAGAGGAGC TCGTAACTTG CCTAATCAGA 
    TTATAATTTT CCTATTGGCA GAAGGAGAGA TGGAATTTGA TGTTTTTCTG
    AC
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 405195 [Map]; Strand: w
      • AT2G01900.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: -723; Region: promoter
    Flanking Genome Sequence: GT14885 - 5-prime edge
    CCTACTTTCT CCCTGCCACT AGCCATCATT ATTGGTGAAT TGATTAGCTG 
    CTCAAATTAT AAGCCGAATA GAGAAATTAA TAATATCGAG ATTAATATAT
    CGTTAAACAA ATAAAAGTAA GCCTTTGAAT AAAAATATGT AGAGGTCCAC
    AGTGATTAGA CCGACCAAAA AATAACAATA TTTAATTTCA CTGCTATAAG
    AAAGTTTATG ACATAATGAT AAGATTCAAA GACCAAAATA GTAGAATTCT
    ATAATTAGAG GAAAATACTA TTTTCTTTTC TCATTATACT ATACTTGCCA
    GCCCATTTTG TCATTTATCA TGAAAATTAA ATTGTTTTAC ATATCTTCAT
    TTAAATGTTT ATAGTAACAA GTTGGACCCT CCTCGTTATC AAAGGTAATC
    GCCTTCAGTG TTTAATAAAG TAATACGATT GAGGACACAA AGTGAATGGT
    TTAAAATTAA TTTCCGTGGG ATTTAAAGAC GAATACAATG TGATCAAGGT
    GGTTTGACGT CTAACTATAG CTAGTCTAAA CTAGCTAGCT AGGCTAACAA
    CCAGTAATAA TAGCTGACCA ATCAT

AT2G01890.2

Model type
Protein coding
Short Description
purple acid phosphatase 8
Curator Summary
Encodes a purple acid phosphatase (PAP) belonging to the low molecular weight plant PAP group.
Computational Description
purple acid phosphatase 8 (PAP8); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 3 (TAIR:AT1G14700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01900.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: hypocotyl, sepal, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G37440.1); Has 2320 Blast hits to 2027 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 735; Fungi - 544; Plants - 769; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink).
Link
InterPro Scan - TAIR