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GT14889

CSHL Arabidopsis genetrap mutant lines

Original: GT14889

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14889

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12817718 [Map]; Strand: c
      • AT2G30020.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 1630; Region: intergenic
      • AT2G30032.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: 1811; Region: intergenic
    Flanking Genome Sequence: GT14889 - 3-prime edge 
    AAAGAAACGG TAGAGGATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AGTTTTGCGT GTGGTCCCTC GTTTTTTTTA TTTAATACAC TATAGTTTTT 
    TTTTTTTTTT TTTTGGCAAA AAAAAAATTT TTTGTAAAGC CCTTTTTTTT 
    TTTTGGGAAA ATTTTTTTCC CGGGGGGATT TCCAAAATTA GGGGGAACCC 
    CCAAAAAAAA TTCCCCCGGA AGGGGGGGGA AATTTAAAAA CCGGGAAAAA 
    AATTCCCCCC ATTTTTTTGT TCCAAAAGGG GGGCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12817667 [Map]; Strand: c
      • AT2G30020.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 1579; Region: intergenic
      • AT2G30032.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: 1862; Region: intergenic
    Flanking Genome Sequence: GT14889 - 5-prime edge 
    CCTACTTTCT CTCTGTCGAC GAACCGATTC TAACTTTGAA AGATAGTAAA 
    TGCCAACCAA TGGCCAGTTG TAGTGGACGA ACTCTGTCTT AATTACATCG 
    TGAATATTTA ATTGCATGCG AGTGTGGTTT ATAGTATTAT TGATATTTTC 
    TTTGTTTATT TAGTTAATTA TTATGGGTTT GTTAACAAGT CTAATTCAAC 
    TACTTCTTTT CAAGCTTTAT TCCTCTTGGA AAAAAAAACT GCCCAAAAGA 
    TAAAATAGAA ATTGACTTGT AAAATAACAT AAAATAGACA TTGACTTGTA 
    ATGAGATGAA AATAGAATTA AAAATCATGA TTTTCACAAT TAAAATATGA 
    AAAGATACAG GTAAAGTTAG GTTTTAGGGA TTAACTCAAT GTCGATCATG 
    TAGGTCATGG TGTTATTTGT TAGGCTTTCA TTCATAAATT TGTTTTTGAA 
    AAAAAAAACC GGGAAAAAAA TTAAACCTGA TAGGGGGAGC CAAATTTAGG 
    GAACCAACCC CACCTTTTGT TCCTTAAATT TAAGTCCCCC GAAACCGGAA 
    AAACACTTAA TGGGGGGGGA ACTAAAATCC TATTTTCCCG AAAATTGGTT 
    TGGGAAAGTT AAAAT

AT2G30020.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Curator Summary
Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.
Computational Description
Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G30032.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR