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GT14892

CSHL Arabidopsis genetrap mutant lines

Original: GT14892

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14892

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28673641 [Map]; Strand: c
      • AT1G76420.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14892 - 3-prime edge 
    TGAAACGGTA GAGGTTTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAC 
    TCCCAAGGTT CACAGCGGTT GAGATCAACT TCGGAAATGT GAATGCCGGA 
    GAGACCACCA TGGAAGATTT TGGAAGCTAA GTAGAAGGTA ATGAGCTCTT 
    CGTCCGTCGG GTGAAACCGG AAGCCAGGTG GCAATCCTCT CTCGTTCCTT 
    TCATCTCACT CGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28673558 [Map]; Strand: c
      • AT1G76420.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT14892 - 5-prime edge 
    TAATATATTA TACATTTTGT CTCTTCTTTA CCTCATAAGT TTTATTTTGG 
    AATCTTGTTT TTAGTTGAAT ATTTTGATAA ATCTTTTAAC AAGAAAAAAG 
    TGTAACGTTT TGAAATTGTT GTTATATGAA GAAATGGCGA AGATGGGAGA 
    GAGAGAGTGG TACTTTTATA GTCTAAGGGA CAGGAAATAT CCGACAGGTT 
    TGAGGACTAA CAGAGCAACT ACTGCTGGAT ACTGGAAAGC TACCGGCAAA 
    GATAAGGAAG TCTTCTCCGG CGGAGGAGGA CAGCTTGTTG GGATGAAGAA 
    GACGTTGGTG TTCTACAAAG GTAGGGCTCC ACGTGGCCTC AAGACTAAGT 
    GGGTCATGCA TGAGTATCGC CTCGAAAACG ACCATTCACA CCGCCACACG 
    TGTAAGGTAA ATTAACACTC TTTTACTCTC ACTCGTGCGT CTCACTCTCA 
    CTCGTGCATC TCTTTCTTTA AAAAAATTTG TATTTTTTCT CTTGTCAATT 
    TATGAGTTGA CTTTTTGAAA CCAAAAATTT TATACTACTA GTGTGTGAAA 
    CTAGTAATTT AAACCCTGTT ACTTTTATTC CCACACGTCC ATTTCTTATA 
    ACATTAAATT CTTTTTAACT TTGCGAATGT AATAGAAATT TGATGTTTTT 
    GTTCTCCATT AATGTGTTAA CTTTTTAAAT CCACAAGTTG AAAAGAAAGG 
    TTTAACGAAA TATTTAACTT TTTTTTTCCC ATTTCATGTG TTTTGTTTCA 
    ATAGTATTGT CACTATGTTG TTTGGC

AT1G76420.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curator Summary
Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.
Computational Description
CUP SHAPED COTYLEDON3 (CUC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3005; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR