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GT14897

CSHL Arabidopsis genetrap mutant lines

Original: GT14897

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14897

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19381374 [Map]; Strand: c
      • AT5G47850.1 - [+] show detail - CRINKLY4 related 4
        Distance: -292; Region: promoter
      • AT5G47860.1 - [+] show detail - Protein of unknown function (DUF1350)
        Distance: -145; Region: promoter
    Flanking Genome Sequence: GT14897 - 3-prime edge 
    AATGAAACGG TAGAGGATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    AATAGTAGGG CTTGTACAAA TCCTTCATGA GAGGATGACA CTCTTCGTCA 
    TTTAATGAAA GCAAATGTGG CCCATTAAGT ATAATTGAAG CCCAATCACC 
    TTTTACACAA TTAACAATTA AGTATTTGGT CTCATCACAA TGTTTGCGTT 
    AGCTGCGAAA CAAGATGCTG TTACAGTCAT AGAAGTCTTA TGCGTACACG 
    ACTCCGATTT CAAAATCTGA ACGGAATATA AACTCTCGAC GACGAAAATC 
    TCAAAATACC CAAAATCTCC TCCGACTCCG AGCTATGGCT ACGATGTTTC 
    ATTTCGACTC GAACAAGTGG TGGCAATAGA GAAAGAGATA ATGTGCGTTA 
    CACAAACTTG CGTTTTCTAC TTTGCTTATC GTCTCACAAT TTCTATCTCT 
    GTCTCTGGTT CACACGCTTA TGTCTTATAT AAGTTAGCTA CAACTTGAAA 
    GGAGAAGGAA ATTTATTAGT GATGGTGTGA TGTGA

AT5G47850.1

Model type
Protein coding
Short Description
CRINKLY4 related 4
Computational Description
CRINKLY4 related 4 (CCR4); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 3 (TAIR:AT3G55950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G47860.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1350)
Computational Description
Protein of unknown function (DUF1350); LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1350 (InterPro:IPR010765); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1350) (TAIR:AT3G43540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR