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GT14913

CSHL Arabidopsis genetrap mutant lines

Original: GT14913

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14913

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 223241 [Map]; Strand: w
      • AT2G01490.1 - [+] show detail - phytanoyl-CoA dioxygenase (PhyH) family protein
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: GT14913 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACTCACAA AGATAGTGAT 
    CTTAAAAGAA ATTTGATAAA CAGTAACTCA CAGTGTTTTT CCACGACTGG 
    CTTGAATCAA GGAAGAACAT AGAGAGGCTC CGGCATTTTT GCTCTTTGTA 
    TCCTAGCATA TAGTTAAATT GTAAAACATT CCATGTTAAA AGAACAAAGA 
    ACAAACTGAA AAGACTTGGA ATGAAATGAG GAAAACTTAA ATAAAAGGCT 
    TACCAGTTGT CTTTTGCCCA TTTACATCCA TCAGATTCTA CTACATGTAA 
    GCTATAGGCA TGTCTTGACT TCGAGGATAG ATTCTCGAAA CTGCATCTCA 
    AAATCCACAT TGAAGAGAAC ATGATTTTTC AGAGCTCAGC CAAATCTAAA 
    CTACAAGCAA GCTACTTCAT ATGGGAGATG AAATTAACCT TTGATGGATT 
    AGATCACCAT GAATGGCAAT CAATGAGCCT G

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 223364 [Map]; Strand: w
      • AT2G01490.1 - [+] show detail - phytanoyl-CoA dioxygenase (PhyH) family protein
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: GT14913 - 5-prime edge 
    GGGCCTTCTT GTGTCGTTTA CTTGTTGAAA TACAATTTGT TTCTTCTTGG 
    TCTCTGTAGT TCTGTCTTTA AATAACCAAA CTCTGTGGTC AATAAAGTGT 
    GACAGTGATT ACTTGATGTT TCTTTGAATT CACAGTAATT AGACACAAGA 
    GTAAGGACTC ATAAACAGTT AAAGAGGTAG AAGAAAGTTT GAGAAATAAG 
    TGACCATTGG ATTTTGTTTG AAATGTTATT GTGATTGGAG GAATGGGACA 
    AAACTATCTC TGTCCTATCG TAATTGTACC AGGGCAAAAG AAAACGTGGG 
    ACAGAGATCT TTTGAGTTGC AGAAACAATA GAGTCAATTA AAGAGTTATG 
    GTCGTAGTGA TAAATGCTTT GTGTAGTTGT CTTTTGGAAG TGTTCTTGAT 
    CCTCTCTCTC TCAGAAAGCA ATTTGTCATA CATTCATGAT CTTAAAAGTA 
    CAAAAGATGG GTCGATGTTC TGTTTCTGTT AAATTATTAT TTCAGGATTT 
    TGCACAAAAA CCCTCGGAAA CTATAGACAT TATGAGTAAT CCTTTATGTG 
    ATTAAAGACC ATTTGAACAA CACATATCTA TGAGTAAACT CTTTTGTTTC 
    CATTAAATTC AAAAAATAAA TGAGGAATAG GCAAAAC

AT2G01490.1

Model type
Protein coding
Short Description
phytanoyl-CoA dioxygenase (PhyH) family protein
Computational Description
phytanoyl-CoA dioxygenase (PhyH) family protein; FUNCTIONS IN: phytanoyl-CoA dioxygenase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phytanoyl-CoA dioxygenase (InterPro:IPR008775); Has 2926 Blast hits to 2921 proteins in 334 species: Archae - 4; Bacteria - 485; Metazoa - 347; Fungi - 101; Plants - 64; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink).
Link
InterPro Scan - TAIR