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GT14914

CSHL Arabidopsis genetrap mutant lines

Original: GT14914

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14914

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 223259 [Map]; Strand: w
      • AT2G01490.1 - [+] show detail - phytanoyl-CoA dioxygenase (PhyH) family protein
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: GT14914 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACTCACAAAG ATAGTGATCT TAAAAGAAAT TTGATAAACA GTAACTCACA 
    GTGTTTTTCC ACGACTGGCT TGAATCAAGG AAGAACATAG AGAGGCTCCG 
    GCATTTTTGC TCTTTGTATC CTAGCATATA GTTAAATTGT AAAACATTCC 
    ATGTTAAAAG AACAAAGAAC AAACTGAAAA GACTTGGAAT GAAATGAGGA 
    AAACTTAAAT AAAAGGCTTA CCAGTTGTCT TTTGCCCATT TACATCCATC 
    AGATTCTACT ACATGTAAGC TATAGGCATG TCTTGACTTC GAGGATAGAT 
    TCTCGAAACT GCATCTCAAA ATCCACATTG AAGAGAACAT GATTTTTCAG 
    AGCTCAGCCA AATCTAAACT ACAAGCAAGC TACTTCATAT GGGAGATGAA 
    ATTAACCTTT GATGGATTAG ATCACCATGA ATGGCAATCA ATGAGCCTGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 223313 [Map]; Strand: w
      • AT2G01490.1 - [+] show detail - phytanoyl-CoA dioxygenase (PhyH) family protein
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: GT14914 - 5-prime edge 
    CTTTCTCCCT GTTTGTGAGA ACTATGAACA GTAATAAGAA CATGGCTAAA 
    AGGGCCTTCT TGTGTCGTTT ACTTGTTGAA ATACAATTTG TTTCTTCTTG 
    GTCTCTGTAG TTCTGTCTTT AAATAACCAA ACTCTGTGGT CAATAAAGTG 
    TGACAGTGAT TACTTGATGT TTCTTTGAAT TCACAGTAAT TAGACACAAG 
    AGTAAGGACT CATAAACAGT TAAAGAGGTA GAAGAAAGTT TGAGAAATAA 
    GTGACCATTG GATTTTGTTT GAAATGTTAT TGTGATTGGA GGAATGGGAC 
    AAAACTATCT CTGTCCTATC GTAATTGTAC CAGGGCAAAA GAAAACGTGG 
    GACAGAGATC TTTTGAGTTG CAGAAACAAT AGAGTCAATT AAAGAGTTAT 
    GGTCGTAGTG ATAAATGCTT TGTGTAGTTG TCTTTTGGAA GTGTTCTTGA 
    TCCTCTCTCT CTCAGAAAGC AATTTGTCAT ACATTCATGA TCTTAAAAGT 
    ACAAAAGATG GGTCGATGTT CTGTTTCTGT TAAATTATTA TTTCAGGATT 
    TTGCACAAAA ACCCTCGGAA ACTATAGACA TTATGAGTAA TCCTTTATGT 
    GATTAAAGAC CATTTGAACA ACACATATCT ATGAGTAAAC TCTTTTGTTT 
    TCATTAAATT CAAAAAATAA TGAGGAATAG GCAAAACATT AAAGATGTTT 
    TGTCTTCATC CATCAAAACT CAAATGTAGC CTCAACGGTA CGCACTTTTT 
    TG

AT2G01490.1

Model type
Protein coding
Short Description
phytanoyl-CoA dioxygenase (PhyH) family protein
Computational Description
phytanoyl-CoA dioxygenase (PhyH) family protein; FUNCTIONS IN: phytanoyl-CoA dioxygenase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phytanoyl-CoA dioxygenase (InterPro:IPR008775); Has 2926 Blast hits to 2921 proteins in 334 species: Archae - 4; Bacteria - 485; Metazoa - 347; Fungi - 101; Plants - 64; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink).
Link
InterPro Scan - TAIR