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GT14920

CSHL Arabidopsis genetrap mutant lines

Original: GT14920

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14920

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 223056 [Map]; Strand: w
      • AT2G01490.1 - [+] show detail - phytanoyl-CoA dioxygenase (PhyH) family protein
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: GT14920 - 3-prime edge 
    TTAAAAGAAC AAAGAACAAA CTGAAAAGAC TTGGAATGAA ATGAGGAAAA 
    CTTAAATAAA AGGCTTACCA GTTGTCTTTT GCCCATTTAC ATCCATCAGA 
    TTCTACTACA TGTAAGCTAT AGGCATGTCT TGACTTCGAG GATAGATTCT 
    CGAAACTGCA TCTCAAAATC CACATTGAAG AGAACATGAT TTTTCAGAGC 
    TCAGCCAAAT CTAAACTACA AGCAAGCTAC TTCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 223312 [Map]; Strand: w
      • AT2G01490.1 - [+] show detail - phytanoyl-CoA dioxygenase (PhyH) family protein
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: GT14920 - 5-prime edge 
    ACTTTCTCCC TGTTTGTGAG AACTTGAACA GTAATAAGAA CATGGCTAAA 
    AGGGCCTTCT TGTGTCGTTT ACTTGTTGAA ATACAATTTG TTTCTTCTTG 
    GTCTCTGTAG TTCTGTCTTT AAATAACCAA ACTCTGTGGT CAATAAAGTG 
    TGACAGTGAT TACTTGATGT TTCTTTGAAT TCACAGTAAT TAGACACAAG 
    AGTAAGGACT CATAAACAGT TAAAGAGGTA GAAGAAAGTT TGAGAAATAA 
    GTGACCATTG GATTTTGTTT GAAATGTTAT TGTGATTGGA GGAATGGGAC 
    AAAACTATCT CTGTCCTATC GTAATTGTAC CAGGGCAAAA GAAAACGTGG 
    GACAGAGATC TTTTGAGTTG CAGAAACAAT AGAGTCAATT AAAGAGTTAT 
    GGTCGTAGTG ATAAATGCTT TGTGTAGTTG TCTTTTGGAA GTGTTCTTGA 
    TCCTCTCTCT CTCAGAAAGC AATTTGTCAT ACATTCATGA TCTTAAAAGT 
    ACAAAAGATG GGTCGATGTT CTGTTTCTGT TAAATTATTA TTTCAGGATT 
    TTGCACAAAA ACCCTCGGAA ACTATAGACA TTATGAGTAA TCCTTTATGT 
    GATTAAAGAC CATTTGAACA ACACATATCT ATGAGTAAAC TCTTTTGTTT 
    CCATTAAATT CAAAAAATAA ATGAGGA

AT2G01490.1

Model type
Protein coding
Short Description
phytanoyl-CoA dioxygenase (PhyH) family protein
Computational Description
phytanoyl-CoA dioxygenase (PhyH) family protein; FUNCTIONS IN: phytanoyl-CoA dioxygenase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phytanoyl-CoA dioxygenase (InterPro:IPR008775); Has 2926 Blast hits to 2921 proteins in 334 species: Archae - 4; Bacteria - 485; Metazoa - 347; Fungi - 101; Plants - 64; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink).
Link
InterPro Scan - TAIR