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Mutant Lines
GT14927

GT14927

CSHL Arabidopsis genetrap mutant lines

Original: GT14927

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14927

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 4121926 [Map]; Strand: c
- AT3G12920.1 - [+] show detail - SBP (S-ribonuclease binding protein) family protein
  Distance: 0; Region: exon3 (3UTR)

AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTATAA 
CCTAACCCAC GATTTTTAGC AACAGAGGTC CCTCGTGAAC CCCTTACGAA 
ATTTAAAGAT CTGACACATA TGTCAAAGAT TCGTGTTCCA TCATCATCAT 
CACCATCCAA AGAAAAAAAG AATGAACAGT TTTTAACCAA GAAACTTTTG 
TCTACTATTT ACTTTTTTGG GGGGCATTTA CATTTTACTG GTATTGGTTA 
GGTCTAAGAG GAAAGATTAA CATGTAGACT AGCGGTCTTT GGAGATTTAC 
ATATAGGACA AGTGTTGAGT GAAGAGCCAC ACACAGAACA TAGACACATG 
TGTCTGCACG GAAACAGAAA CACACTTGCT TCTCCTTTCC CACAGCTTCT 
ACACATACTC ATCCCTACCC TACACATCTT TTTCGTATCC TGCGCCTCTC 
CCGCTAACTT CCACCGTTCT T

5 prime edge [+] show sequence

Chromosome: 5; Position: 16616169 [Map]; Strand: w
- AT5G41540.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: -106; Region: promoter

CGGAGCGCTG CATTGACTTT GAAAGGAGTT CTAATGCAGT TATCCCAACA 
CTAAATAGAT CGAGGAGAAA CTCTCTTATA GATTTGAATG CTGATTGGTT 
GATTTTTTAA GTCTTCGTAT GATGGAACTT CCTCATCGCC GAGGCCTCCA 
CTACTCATAA TAAAAAACCG AAACACATTA TCAGATATTC TTTTGCAGGT 
CACAATGAAA CAGCGATACG ATATTAAAAA AGATGATAGA GAGAGAGAGA 
GACTTTTCTC TTCTTCTGTT GTTTCTTAGA AAAGCAATCT ATGGGATTCA 
TGACACAATT GTGAGTGCTT GATATTAATA ACATTATAAA TCTTGCAAAT 
GGGTTTTCTG AAATATAGCA GACTTAATCA ATTGACTTGG TTATTTATTA 
TCTCTTTCTA CTAGTATAAC AAAACCTAAT CAGAATGGTG TGTCTTTTCA 
ATAGTTGCAT AAAATATATT CTTAATGACT AGACAACTAT CCTAACAGTC 
AAAGAGAGGA TAGACGAGGA GCACCTCAAA TATATCTTTC TTGAGATTTG 
ACA

AT3G12920.1

Model type: Protein coding
Short Description: SBP (S-ribonuclease binding protein) family protein
Computational Description: SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2); Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 874; Fungi - 0; Plants - 566; Viruses - 36; Other Eukaryotes - 158 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41540.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR