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GT14930

CSHL Arabidopsis genetrap mutant lines

Original: GT14930

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT14930

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19381382 [Map]; Strand: c
      • AT5G47850.1 - [+] show detail - CRINKLY4 related 4
        Distance: -300; Region: promoter
      • AT5G47860.1 - [+] show detail - Protein of unknown function (DUF1350)
        Distance: -137; Region: promoter
    Flanking Genome Sequence: GT14930 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAATAATAG 
    GGCTTGTACA AATCCTTCAT GAGAGGATGA CACTCTTCGT CATTTAATGA 
    AAGCAAATGT GGCCCATTAA GTATAATTGA AGCCCAATCA CCTTTTACAC 
    AATTAACAAT TAAGTATTTG GTCTCATCAC AATGTTTGCG TTAGCTGCGA 
    AACAAGATGC TGTTACAGTC ATAGAAGTCT TATGCGTACA CGACTCCGAT 
    TTCAAAATCT GAACGGAATA TAAACTCTCG ACGACGAAAA TCTCAAAATA 
    CCCAAAATCT CCTCCGACTC CGAGCTATGG CTACGTGTTC CATCTTTGCC 
    GGAACAGTCT TTCTCTCCCC GCAGGCGATT CTGTAGCTTT TCTCACAATC 
    GCGGGTCTCA ACCT

AT5G47850.1

Model type
Protein coding
Short Description
CRINKLY4 related 4
Computational Description
CRINKLY4 related 4 (CCR4); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: CRINKLY4 related 3 (TAIR:AT3G55950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G47860.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1350)
Computational Description
Protein of unknown function (DUF1350); LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1350 (InterPro:IPR010765); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1350) (TAIR:AT3G43540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR