1. Home
  2. Mutant Lines
  3. GT14954

GT14954

CSHL Arabidopsis genetrap mutant lines

Original: GT14954

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14954

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18018452 [Map]; Strand: w
      • AT4G38520.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -146; Region: promoter
      • AT4G38520.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -179; Region: promoter
    Flanking Genome Sequence: GT14954 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACTCGC 
    CATCGTTGGT CTTTTATGGG TCTTGTCTGG TAAGAATCAC TCTTAGTCTT 
    AAGACTATAG AGAGAGATAA AGAGAGAAGA TAAAAAAAAC AACTCCAACT 
    TTCTTTCTTT TTTTTACATA AAAACGTCAA AGGAGGATGT CTCGTTCGGC 
    GACTTGACCT CTCTCTCTCT CTCTCTTTTA CCTTCATTGT TCACTGTTTC 
    CAGACATTGA AAGAAAGATC ATTAGTTTCT GAGGGGATAA CCATTTTTTT 
    TTCTTCTAAA AAAAGTTTTT TTTTTGGAAA AGGGGTTTTT TTTCTTTTTT 
    TTTTTCCCCA AGCGGGGGGT TTATTTTAAT TTAAAAAAAA AAAAAACGGG 
    GGGTTTTTTT TTAAAAAAAA GAAAAATTTT GGGGTGGGGG GGACCCCCCC 
    GAAGCCGAAA AAAATCAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18018544 [Map]; Strand: w
      • AT4G38520.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -238; Region: promoter
      • AT4G38520.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -271; Region: promoter
    Flanking Genome Sequence: GT14954 - 5-prime edge 
    CATCAAAGGT CCCAGCTTTC GGGCTCCACT TCCCTCTCGT CCTTTTTTGC 
    CTCATTAGAT GGACAACACC AAACAGTGGC AAAGAATAAT ATTACAGTTT 
    TTTTAGGGAA GAAAATAAAA TAGTTGATAT TATTGATATA ATAATTCATT 
    CAAGTCTCCT CTTTATTTTA AAAATATTCA ACTCTTTTAC TTTAGACATT 
    ATCATAAACT GGGGTCAAAC GGAAGATTTT TCTTCAACGT TTAATAAAAT 
    CTCTTAAGAC AAATCAAAGA AGAGTAAAAA TATACGGTTT CGATAAAATT 
    TGGTTATGTG GCGGTGTTAC ATGACTACGA CTGATAAAAC TACACGAGTA 
    CTTTTGTTTT TATGTCACCA AGATTTATTT CTTTTACTTA CCTCCATGTG 
    TTTTTTTCTT TCTTCGTTAA AACTACTCCT CGTAAATTAT AATCAAGATT 
    TTAAGCAGTG TGCATATAAA ATAAAATACA TGTACAGTCT AGAAATAATA 
    TATGTGGATT CATGAATGTT TCATTTTTAA TTTCCCCACA CAATTT

AT4G38520.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 5534 Blast hits to 5531 proteins in 297 species: Archae - 0; Bacteria - 21; Metazoa - 1498; Fungi - 573; Plants - 2468; Viruses - 5; Other Eukaryotes - 969 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38520.2

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR