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GT14961

CSHL Arabidopsis genetrap mutant lines

Original: GT14961

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14961

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4873263 [Map]; Strand: c
      • AT5G15050.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14961 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGATTCG 
    ACGAAGACGG AGGATCTAAA TCCGTAAACT GAAAATGGAA TCAAACGAGT 
    TTGACCAGAA GAAGAAGCTA AGTTCGTTAG CAACAAGAGA AACAGAGAAC 
    AAATGGATCC GATTGCTAAT GGAAGAATCC ATTTTCGGTC AAGAGATTGT 
    TGCTGGTTAC GAACTTGCAT GTAATAGCTT TTCAATTTCT TCATATTCGA 
    AGCTTCATCA ATTTTTAACA GCTCTTAGAT GGATTCTTCT TCAGTGGTTT 
    GTGGCTTAGA GAGACTTGAG AGTGAAGTGT ACGAATTACG AAATGGAGAA 
    GATGAATGAA GGAATTGGTG TGTTTTTGTT TGTTTGTTGG TCTGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4873185 [Map]; Strand: c
      • AT5G15050.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT14961 - 5-prime edge 
    CTACTTTCTC CCCCAGTATC CGTCTCACTC ACCGTCTCCG TCTCTCCTCC 
    TCCGCCGCCA CGTCTCGCTT ATCTAATCTC CGGCTCCTCT GGTGACGGTC 
    AGATGCTGAA ACGAACTCTA ATGGCGCTTT ATCATCCCAA CAACCAGTAC 
    GTTGT

AT5G15050.1

Model type
Protein coding
Short Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Computational Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR