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GT14976

CSHL Arabidopsis genetrap mutant lines

Original: GT14976

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14976

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 287680 [Map]; Strand: c
      • AT5G01747.1 - [+] show detail - MIR164/MIR164B; miRNA
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT14976 - 3-prime edge
    CGGTAGAGGA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATGTGTG 
    TGTGTGTTGA GTGTGATGAT ATGGATGAGT TAGTTCTTCA TGTGCCCATC
    TTCACCATCA TGACCACTCC ACCTTGGTGA CGATGACGAC GAGGGTTCAA
    GTGTTACGCA CGTGGGAATA TACTTATATC GATAAACACA CACGTGCGTG
    TTTGTGTGTA CGAGCTAGCC TAGATCGCGT ATTTTGAGGA AGTAGATACC
    CTCTGCAAAA GTACCTATTT ACGTACGTAC GCAAAGGAAG ATTAGTCTTG
    CGAAATAGTA TCAGGTTAGT CTAATTAACA AAGCTATATG TGATTATATA
    TATGATCACG CATCTTGATC AGCGTCGCTT ATATATTATA TATAATTTAA
    TGTTCATAAA CCATATGTGT CATAATGAAC ATAGTTTCGG TTAGCGAGTA
    TTAGACAGGA GATCCAACTA TACAATAATA CAAGTCTTTT TCTTTTAAAT
    GAAAATTTAC TTATGGTGCT AATTCTATTG TCATTAACCG ATGTTTCATT
    TTGGAGTAAC TGTCAATCTG TCATATCATT TCAAGCAAAG GGTAAATACT
    AAAACCCTTT TGGTTGCCCC TTTTTTAGTT ATTAATGAGG TTAATAGAGA
    TAATCAAACG ATATGATAAA TGTATAAGAT TACCGAGTAA AGATGAGTAA
    TTTAATCGAT TAGTGGAGCA TGCGTTCATT TTTTTAAGAT TATACTTGCT
    CTTGCTGGTT ACCACCTTGT TCGCTCTTTT ACGGGCTTAA AAACATACAC
    ATATTATACG TA

AT5G01747.1

Model type
miRNA
Short Description
MIR164/MIR164B; miRNA
Curator Summary
Encodes a microRNA that targets several genes containing NAC domains including NAC1. Overexpression leads to decreased NAC1 mRNA and reduced lateral roots. Loss of function mutants have increased NAC1 and increased number of lateral roots. Also targets ORE1 to negatively regulate the timing of leaf senescence. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UGGAGAAGCAGGGCACGUGCA
Link
InterPro Scan - TAIR