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Mutant Lines
GT15008

GT15008

CSHL Arabidopsis genetrap mutant lines

Original: GT15008

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15008

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 117496 [Map]; Strand: c
- AT2G01190.1 - [+] show detail - Octicosapeptide/Phox/Bem1p family protein
  Distance: 0; Region: exon2 (3UTR)
- AT2G01200.1 - [+] show detail - indole-3-acetic acid inducible 32
  Distance: -521; Region: promoter
- AT2G01200.2 - [+] show detail - indole-3-acetic acid inducible 32
  Distance: -522; Region: promoter

CGTTACCGAC CGTTTTCATC ATCTTGTGTT TAAAAGTGTT GTGTGAGTAA 
ATTAAAAAAA CAAATAAATA GTGCTTCTTG GTGGGATTTT ACATTATATA 
GTTGCAATTG ATACATGTAG TGCTTTACCA TTTTCCTGGA TCTTATATCA 
TATTATTATC ATTCATCTCA CTCGGCAAAT GTATCACTTT TTTGATCATC 
ATCTCTCTAT CTTGTTTTTT CAAGAGACTT TGAAGGCTAT AATATTGTTC 
AGAAAGATTC TGAAATGTTA TGTATAACAT TTAATATTTG GAAGAATGTA 
TGTCTGGCTT CTTGCTATCC ATGGGAGCAT AGGTACAGAT ATTAAAACAT 
GTGTGTGGTC TTGCAAAAGT ACACACAAAC CCTACAACTT CTAAGAGACA 
AGGTGTGGGT GAAAAAGGTA GTGACAAAAT CGATCTGTCT TGCAATTTAG 
CAACACACCT ATCTCTTTTG AAAGAGATAG GCATTTGTAT CTTTACCTAA 
ACACCA

5 prime edge [+] show sequence

Chromosome: 4; Position: 139290 [Map]; Strand: c
- AT4G00320.1 - [+] show detail - F-box/RNI-like superfamily protein
  Distance: -649; Region: promoter

CCTACTTTCT CGATTGTTAT GGCACTTGTT TTTTTGATGC GGATATGTGT 
GGGAAACTTG GGTCATTTCT TTGTAATGAA CTTTATTAGG ATGCAAATTT 
CTACAACATC TATATTGTTG ACTGATCTTC TAATTGATAT CTTTTTGTGC 
TATTGATCTA CTTTATGATC TATAAGCTGA AGAGTCTTGT GTTTGAGTCT 
TGTGTTATGA TCAAGTTGCT GCAAATAAAA GTTCA

AT2G01190.1

Model type: Protein coding
Short Description: Octicosapeptide/Phox/Bem1p family protein
Computational Description: Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01200.1

Model type: Protein coding
Short Description: indole-3-acetic acid inducible 32
Curator Summary: Belongs to auxin inducible gene family.
Computational Description: indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01200.2

Model type: Protein coding
Short Description: indole-3-acetic acid inducible 32
Curator Summary: Belongs to auxin inducible gene family.
Computational Description: indole-3-acetic acid inducible 32 (IAA32); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 34 (TAIR:AT1G15050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00320.1

Model type: Protein coding
Short Description: F-box/RNI-like superfamily protein
Computational Description: F-box/RNI-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT5G41830.1); Has 1728 Blast hits to 1676 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1728; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR