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GT15030

CSHL Arabidopsis genetrap mutant lines

Original: GT15030

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15030

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26527943 [Map]; Strand: w
      • AT5G66430.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -1144; Region: intergenic
      • AT5G66440.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2292; Region: intergenic
    Flanking Genome Sequence: GT15030 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAACATTG 
    ACAACTTTTT ACATGCAATA TATGTATGAT GTTAATTGTT AAGCAATTTC 
    TACTTTGAAA ATAAAGAGCC ACTGCTAAAT TCAGAAATAA TCTTATATAG 
    TAGTGAACTT GATAAGCACA CAAATTTAGA AATGTCTAAC CAAATAGTTC 
    ACCTTTATTA CTTCAAGATC ATTTTCCAAA CAGAGAGATC TATAATGTTA 
    TCAGTTATCA CTTGTATTAA TGGTCATGTA AAGCGTAGCC CAAAGCCCAC 
    TTCATCATGA TTTGAGCTGT AGGAGTAAGA TTCTGCTACG GATATGAGAC 
    CTGTCGTCTT TAGTTATATG GGCCGAAGTC AGAGGTTGAT AACGAGCATA 
    GAAATATCGT GATACTGAAA GGCCAAAATG GC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26527932 [Map]; Strand: w
      • AT5G66430.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -1133; Region: intergenic
      • AT5G66440.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2303; Region: intergenic
    Flanking Genome Sequence: GT15030 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAACATTGA CAACTTTTTA 
    CATGCAATAT ATGTATGATG TTAATTGTTA AGCAATTTCT ACTTTGAAAA 
    TAAAGAGCCA CTGCTAAATT CAGAAATAAT CTTATATAGT AGTGAACTTG 
    ATAAGCACAC AAATTTAGAA ATGTCTAACC AAATAGTTCA CCTTTATTAC 
    TTCAAGATCA TTTTCCAAAC AGAGAGATCT ATAATGTTAT CAGTTATCAC 
    TTGTATTAAT GGTCATGTAA AGCGTAGCCC AAAGCCCACT TCATCATGAT 
    TTGAGCTGTA GGAGTAAGAT TCTGCTACGG ATATGAGACC TGTCGTCTTT 
    AGTTATATGG GCCGAAGTCA GAGGTTGATA ACGAGCATAG AAATATCGTG 
    ATACTGAAAG GCCAAAATGG CCCACATTAA TCCAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26528002 [Map]; Strand: w
      • AT5G66430.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: -1203; Region: intergenic
      • AT5G66440.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2233; Region: intergenic
    Flanking Genome Sequence: GT15030 - 5-prime edge 
    CTACTTTCTC CCTGGTCATG TCAATTATAC GAGACTATAC GCTTAGTCAA 
    AGGTATAAAA ATTAAGATGA AAGAAAACAA GTCGAGAGTA CTCGATGTCA 
    TGTCCAATCA ATTTATTGTC TTTTTATGTT ATTTAAGAAC CAAAAAGAAA 
    AACTTTAAAC CCTCTATCTA TCTATGATGA ATGAAGCATG TCGATAGGCA 
    CATAAATAAT CGAACGCTAG GGAAATTCAA AAAGTCTATA GTACATAAGT 
    TTCGACACTG AAACAATGTG TGGGCAGGGT CCGATATGAG GCACGTTGGC 
    GTTTAAACAC GTTGCATATG TATAAATGAT GATACTGAAA AAATATAGAA 
    TCAAGTAAAA CTACCCTAAA TGGATCATTG ATAAAAAGCA TTATTTCTTT 
    T

AT5G66430.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66440.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR