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GT15067

CSHL Arabidopsis genetrap mutant lines

Original: GT15067

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15067

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16401262 [Map]; Strand: c
      • AT3G44920.1 - [+] show detail - cation/H+ exchanger 11
        Distance: -1537; Region: intergenic
      • AT3G44930.1 - [+] show detail - cation/H+ exchanger 10
        Distance: 796; Region: intergenic
    Flanking Genome Sequence: GT15067 - 3-prime edge 
    ATGTATCTCA GATCCTGAAC TTGAAAAACA TATCTTGTCG AACAAGTTAG 
    GTTTCTTTGT AAAATCTAAG ACATGACTTG AGGCCGTTAA ACTTGTCGGC 
    CCCAAAGAAC AAGTTAGGTT TCTTTATCGA ATCTTGAACC CTGCTTTCTC 
    CATCGATAGG CTCAATGTCT TTAATACTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16401082 [Map]; Strand: c
      • AT3G44920.1 - [+] show detail - cation/H+ exchanger 11
        Distance: -1357; Region: intergenic
      • AT3G44930.1 - [+] show detail - cation/H+ exchanger 10
        Distance: 976; Region: intergenic
    Flanking Genome Sequence: GT15067 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAATC 
    AACAATTGAT GTCTCTATAT GATTTTATTT GAGGATAATG CGTAACAGTG 
    TAACACATAA GTTATCTATG TTGTATATTA TTAGGAGAGA CTTCATAATT 
    TCTTTACTGG ATCGGAACAG AGCCAAGGGT ATGTATCTCA GATCCTGAAC 
    TTGAAAAACA TATCTTGTCG AACAAGTTAG GTTTCTTTGT AAAATCTAAG 
    ACATGACTTG AGGCCGTTAA ACTTGTCGGC CCCAAAGAAC AAGTTAGGTT 
    TCTTTATCGA ATCTAGAACC CTGCTTTCTC CATCGAGAGG CTCAATGTGT 
    TTAATACTTC TATCCCCCTC GACCACAGAA CCCTAACCTT AGGATCTCCG 
    AGAATCTCTT GATATGGAAT CTTCCTTGGT TCCAAGCCTA TTCCTTTCCT 
    TATTCTTCGA TAAATATCTT CTATATTTTC TCGATGAACC TTGTCTTTGA 
    CACCTCTCCA AGTTAACTTC CATCCTTGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16401028 [Map]; Strand: c
      • AT3G44920.1 - [+] show detail - cation/H+ exchanger 11
        Distance: -1303; Region: intergenic
      • AT3G44930.1 - [+] show detail - cation/H+ exchanger 10
        Distance: 1030; Region: intergenic
    Flanking Genome Sequence: GT15067 - 5-prime edge 
    CCTACTTTCT CCCTGTTGTT GATAATGAGG CAAAATCAGA AATATCATAG 
    GAGCTGGGAT CAGGAGTCGA AAGATGAGAT TCTCTCTCCA TCTTCTATAT 
    CTCGCTAAGG TTTCTGTTCA AAGTTTGATA GTCATCCTTT TAACCCACTT 
    AATAATCTCT TAGAAAACAA GCAGCCCTAA CTTGAGCCAC AATACAACGT 
    CTAGGGTTCA TCCGTCTTCA CGCAACCCCA ATATGCCTCT ACAGCTCTAC 
    TCATCCTTCT AACCCACTTA ATAATCTCTT AGAAAACAAG CAACCCTAAC 
    TTGGGCCACA ATTCAACGTC TAGGATTCAT CCGTCTTCAA TATGCCTCTA 
    CTCCCTTGCC GATCCAGTCG TGGGCCTCGT GGCCATCTAG AGTCTAGACA 
    CACAAATGCA TTAAATTTGA AAAGAAAAAT CACACAAAAA GACATCCATT 
    AGAAAATCAA ACACATCACG TTATTGTGCA CAGCACATTG ACATATATAT 
    CTGTCTGTGC CTTCCTCTTT CGCATATGAT TGACGTCTCC TTCTCATCTC 
    ATTCACATCT TCGTAGGTTC AGATTGAGAT TGATCTAAAG ATCTAAACCT 
    AAGCAAAAGG ATTCCAAATC AGCTCAACTT AGTTGCGACT CGAGGAGCTA 
    CGAGAAGAAC TCGGTTTCCT TCTCGGCTGC TGGCTTCTTG TCTTCTTCTT 
    CTTCTCTGTC T

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16401029 [Map]; Strand: c
      • AT3G44920.1 - [+] show detail - cation/H+ exchanger 11
        Distance: -1304; Region: intergenic
      • AT3G44930.1 - [+] show detail - cation/H+ exchanger 10
        Distance: 1029; Region: intergenic
    Flanking Genome Sequence: GT15067 - 5-prime edge 
    TCCTACTTTC TCCCTGTTGT TGATAATGAG GCAAAATCAG AAATATCATA 
    GGAGCTGGGA TCAGGAGTCG AAAGATGAGA TTCTCTCTCC ATCTTCTATA 
    TCTCGCTAAG GTTTCTGTTC AAAGTTTGAT AGTCATCCTT TTAACCCACT 
    TAATAATCTC TTAGAAAACA AGCAGCCCTA ACTTGAGCCA CAATACAACG 
    TCTAGGGTTC ATCCGTCTTC ACGCAACCCC AATATGCCTC TACAGCTCTA 
    CTCATCCTTC TAACCCACTT AATAATCTCT TAGAAAACAA GCAACCCTAA 
    CTTGGGCCAC AATTCAACGT CTAGGATTCA TCCGTCTTCA ATATGCCTCT 
    ACTCCCTTGC CGATCCAGTC GTGGGCCTCG TGGCCATCTA GAGTCTAGAC 
    ACACAAATGC ATTAAATTTG AAAAGAAAAA TCACACAAAA AGACATCCAT 
    TAGAAAATCA AACACATCAC GTTATTGTGC ACAGCACATT GACATATATA 
    TCTGTCTGTG CCTTCCTCTT TCGCATATGA TTGACGTCTC CTTCTCATCT 
    CATTCACATC TTCGTAGGTT CAGATTGAGA TTGATCTAAA GATCTAAACC 
    TAAGCAAAAG GATTCCAAAT CAGCTCAACT TAGTTGCGAC TCGAGGAGCT 
    ACGAGAAGAA CTCGGTTTCC TTCTCGGCT

AT3G44920.1

Model type
Protein coding
Short Description
cation/H+ exchanger 11
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 11 (CHX11); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 10 (TAIR:AT3G44930.1); Has 2197 Blast hits to 2179 proteins in 766 species: Archae - 96; Bacteria - 1401; Metazoa - 0; Fungi - 111; Plants - 516; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44930.1

Model type
Protein coding
Short Description
cation/H+ exchanger 10
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 10 (CHX10); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 11 (TAIR:AT3G44920.1); Has 3267 Blast hits to 3245 proteins in 1126 species: Archae - 161; Bacteria - 2335; Metazoa - 0; Fungi - 113; Plants - 528; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).
Link
InterPro Scan - TAIR