1. Home
  2. Mutant Lines
  3. GT15075

GT15075

CSHL Arabidopsis genetrap mutant lines

Original: GT15075

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15075

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23065265 [Map]; Strand: w
      • AT5G57000.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT5G57000.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15075 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAAT 
    AAAACCCCTA CAAAATCCCT AAATTCCATC GAATTTGCTC ATTCTCGTCT 
    AAAGCAAGAC GAAGATGACG ACTGCTGTCA ACACAGTTTC TGGTAATTCC 
    ATCGAATTCT CTCATCCTCG ATTTGATTTT TTTCTCGTTC TTAGATTGAT 
    TTTGTGTTTA TTCTGATTTT GAGATGATAT TTTTTTCTTC TGGGGTTTAA 
    TGATGATTTA TTGGTTTTAT TGAAGTTATT TAAGGATCAA TCAAATTATT 
    GTTTTCTCTC CTGCGATTGA TTGGTTTATG GTGAATGTAT GAATCTAATC 
    ATTGAGATTC TTAGAAGGCA ATTTGTATAT TATCATTGAG TTCATTGCAG 
    AGTTTTTTTT TGGGGGGTTT TACTGGTGAT TTATTGAGCT TAATCAACGA 
    TGATTTATGG TTATGTTCTA GGAAATTAGT GTTTTTTGGG ATGTGTTATA 
    TTGAAATGTT GAACAACACT GTGGATTTGT TGTGTGTCTC ATGTTATAGA 
    TTTTTTGGCT TTTGTTTGGT TGTTTAGGTG ATGAAGATCG TTCGGACAAA 
    AAGATTCAGG GTGATATTGA TGAGAGTAAG GTCAAAGCAC CAAACATGTT 
    CGAACGAGCA AA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23065251 [Map]; Strand: w
      • AT5G57000.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT5G57000.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15075 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATAAAA CCCCTACAAA 
    ATCCCTAAAT TCCATCGAAT TTGCTCATTC TCGTCTAAAG CAAGACGAAG 
    ATGACGACTG CTGTCAACAC AGTTTCTGGT AATTCCATCG AATTCTCTCA 
    TCCTCGATTT GATTTTTTTC TCGTTCTTAG ATTGATTTTG TGTTTATTCT 
    GATTTTGAGA TGATATTTTT TTCTTCTGGG GTTTAATGAT GATTTATTGG 
    TTTTATTGAA GTTATTTAAG GATCAATCAA ATTATTGTTT TCTCTCCTGC 
    GATTGATTGG TTTATGGTGA ATGTATGAAT CTAATCATTG AGATTCTTAG 
    AAGGCAATTT GTATATTATC ATTGAGTTCA TTGCAGAGTT TTTTTTTGGG 
    GGGTTTTACT GGTGATTTAT TGAGCTTAAT CAACGATGAT TTATGGTTAT 
    GTTCTAGGAA ATTAGTGTTT TTTGGGATGT GTTATATTGT AATGTTG

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23065324 [Map]; Strand: w
      • AT5G57000.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -44; Region: promoter
      • AT5G57000.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15075 - 5-prime edge 
    TTCTCCCTGG GTTTTATTGT GAGAGTCTGA ATTCGGGAAA ATCCGTTGAG 
    AGGTAAAAAT TATAATTGCA TGATTCCCAC AAGGCAACAC TGGAATTGGT 
    CCTAATTTGA AACATCGCCA GACTGTTTTA GCTTAATATT GGGTCCCACT 
    TTTATATGTT TTATGCTAAT TAAGTCATTA AATCCTTCTC TTTTCTTTGT 
    TTAGACCGCC ACGTTAACTA TTTTATAATG GGCCCTTACA AATATTATGG 
    CCCATGGGTC TTACGTTATA ATGGCCATCT TGGTTTTTTT TTGGGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23065318 [Map]; Strand: w
      • AT5G57000.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -38; Region: promoter
      • AT5G57000.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15075 - 5-prime edge 
    CCTACTTTCT CCCTGGGTTT TATTGTGAGA GTCTGAATTT GGGAAAAATC 
    CGTTGAGAGG TAAAAATTAT AATTGCATGA TTCCCACAAG GCAACACTGG 
    AATTGGTCCT AATTTGAAAC ATCGCCAGAC TGTTTTAGCT TAATATTGGG 
    TCCCACTTTT ATATGTTTTA TGCTAATTAA GTCATTAAAT CCTTCTCTTT 
    TCTTTGTTTA GACCGCCACG TTAACTATTT TATAATGGGC CCTTACAAAT 
    ATTATGGCCC ATGGGTCTTA CGTTATAATG GTCATCTTTG TTTTTTTTTG 
    GGTTCAGCCT AACTTTAACA TGCGGAGAAC ACTATTGGAT AGAATTTTAC 
    TCAAAAGTCG ACTTTTATGA AATCGATCCA TTC

AT5G57000.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57000.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 141 Blast hits to 104 proteins in 24 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 8; Plants - 82; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR