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Mutant Lines
GT15084

GT15084

CSHL Arabidopsis genetrap mutant lines

Original: GT15084

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15084

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 8249876 [Map]; Strand: w
- AT3G23140.1 - [+] show detail - C2H2 and C2HC zinc fingers superfamily protein
  Distance: -703; Region: promoter

GAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAG 
TTGTGGACTT GTGGTTGTGC TTAAAGTAGG TAAAACAATT AAGAATATAC 
AAATTGCTCT CATTAATTAA ATAGCATTTA TGAAATTTAT TATGAGTTCT 
CCCCAAAACT GAAATTGATT TCGATGGTTT CTATACTTAG AAAAATATGC 
TTTAACAAAA ACAAAATAAA ACTTAGAAAA AAATATGATC GATGAGCGAT 
CGCCTGCTAC TCTTAGGATT GCTAAAATTA ATATTTTACT GTATTC

3 prime edge [+] show sequence

Chromosome: 3; Position: 8249874 [Map]; Strand: w
- AT3G23140.1 - [+] show detail - C2H2 and C2HC zinc fingers superfamily protein
  Distance: -705; Region: promoter

AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTT 
GTGGACTTGT GGTTGTGCTT AAAGTAGGTA AAACAATTAA GAATATACAA 
ATTGCTCTCA TTAATTAAAT AGCATTTATG AAATTTATTA TGAGTTCTCC 
CCAAAACTGA AATTGATTTC GATGGTTTCT ATACTTAGAA AAATATGCTT 
TAACAAAAAC AAAATAAAAC TTAGAAAAAA ATATGATCGA TGAGCGATCG 
CCTGCTACTC TTAGGATTGC TAAAATTAAT ATTTTACTGT AT

5 prime edge [+] show sequence

Chromosome: 3; Position: 8249932 [Map]; Strand: w
- AT3G23140.1 - [+] show detail - C2H2 and C2HC zinc fingers superfamily protein
  Distance: -647; Region: promoter

ACTTTCTCCC TGTCCCAACT CCTTAGTGAA TGCTTCTTTT AAAAAATTTG 
GTTTTATTAT TTTGTAGGTA TTACATGTTC ACATTCAAAA TATATTTCAC 
ACTATATTAG ATTAAATTTA ACTAAGCTTT AATATTTCAC TAGCTCCTAC 
TAGCCTTCCA ATTTTTACAA TTTTAGTTTG CAATTTTTAC CCTCGATCCA 
AACAAATAAG TACTTTTTTG TACTATATTC AAAGATGAAC AACTTTATAT 
TTTTCTTGAA CAAAAATGAA ATTGAATAGA GAGAAACTAG CTACCCTAAC 
TAGTCACTCG AAACCTTATA AATAACACCT TCTGTAGTTT GTTTTCCTAT 
GAAGAATATT TTTCAACTTT ATCTATTATA TTATCCTTTG TTAAACTTTC 
CCTGAAAATT GTTAGAAAAT AAACTAATTA AAATAATTCT AAGCATGACG 
TTTTTGTAGT TATTAATTCA TGTTACATTA GACGCACGAA TTTAATTATA 
ATACACATCC CCGTAATTAA GTACATTAAA GACCCTAAAG TATATATATT 
AACCATTGAT AAAACAATTT AGCCCTAATT AGTGTCCGTT CACACACATA 
ATCTTTCCTT TAGCTTATAT ATACGCTGGT GGTGTGTTTT TAAGAAGCTT 
CATACACTCA TTTTCAAAAC ATTGAATACT GAGACTTGAG AGAGATCCCA 
ACNGAAGAAG AAGAGAGAGA TGAACCACCG GGACAAACAA ATTGATTCCG 
GCTCTGGCTC TGG

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 8249951 [Map]; Strand: w
  - AT3G23140.1 - [+] show detail - C2H2 and C2HC zinc fingers superfamily protein
    Distance: -628; Region: promoter
Flanking Genome Sequence: GT15084 - 5-prime edge
```
CTCTTAGTGG ATGCTTCTTT TAAAAATTTG GTTTTATTAT TTTGTAGGTA 
TTACATGTTC ACATTCAAAA TATATTTCGC ACTATATTAG ATTAAATTTA 
ACTAAGCTTT AATATTTCGG TAACTCCTAC TAGCCTTCCA ATTTTTACGA 
TTTG
```

AT3G23140.1

Model type: Protein coding
Short Description: C2H2 and C2HC zinc fingers superfamily protein
Curator Summary: Encodes UPRIGHT ROSETTE (URO). Overexpression of URO alters indole-3-acetic acid (IAA) homeostasis.
Computational Description: UPRIGHT ROSETTE (URO); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: auxin homeostasis, regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G43540.1); Has 720 Blast hits to 720 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 4; Plants - 698; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR