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GT15096

CSHL Arabidopsis genetrap mutant lines

Original: GT15096

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15096

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 14528949 [Map]; Strand: c
      • AT5G36870.1 - [+] show detail - glucan synthase-like 9
        Distance: 0; Region: intron25 (CDS)
    Flanking Genome Sequence: GT15096 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAAAGCCTT GTAGCCATAC 
    CATGTTCAAC ATCTCATCAC CCTTGGCGCG AATTCAGGAG AATAACTGAA 
    ATTAGCCTTC TTGCAACAGC TGCAAAACAA AGACAAGGAC AAGATTCAGA 
    TTGTTAATGT CTTGCTGAAA ATATTAGAAA TGGTGACAAA AGACATACTA 
    AAGGAAGAGG TTTCAAGGTA AGATCACCTG ACTTTAAGGT TTTTTTGTTG 
    AATGGTTGAT CAATGTTTTT TTTTTTTTTT TTTGAAAGGG GGCCCTTTAA 
    AAATTCCCTT AAAAAAGGGG GGAAAAATTT CCCCCCCTGG GAAAAAAAGG 
    GGTTCCCCCC CAAAAAAAAT TTTTCAAAAA ATTCTTTTCC CCGGGTTTTT 
    TTCAAAAAAA ACCAAAAAAA AAAAAAAAAC CCCCCCCTTA AAAAATTCCC 
    CCCCCCCCCC TTTTTTTTTC CAAAAAAAGG GGGGGCTTTT CCCCCAAAGG 
    GGGGGGGAAC CCCTTTTTTT TTTTTCCCCC CGAAAAAAAA AAGGTTTTTT 
    TTTTTTTTTT TTTTAAAAAA AGCCCCTAAG GGGTTCCCCC CCC

AT5G36870.1

Model type
Protein coding
Short Description
glucan synthase-like 9
Curator Summary
encodes a gene similar to callose synthase
Computational Description
glucan synthase-like 9 (GSL09); FUNCTIONS IN: 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: shoot apex, petal, root, flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR