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GT15108

CSHL Arabidopsis genetrap mutant lines

Original: GT15108

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15108

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5713901 [Map]; Strand: w
      • AT1G16710.2 - [+] show detail - histone acetyltransferase of the CBP family 12
        Distance: -318; Region: promoter
      • AT1G16710.1 - [+] show detail - histone acetyltransferase of the CBP family 12
        Distance: -388; Region: promoter
    Flanking Genome Sequence: GT15108 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAATTGGGG 
    GAACCAAGGT CGACAATCCA ACAGCCAAGG AGAAGTGTCG GAGATACATG 
    CGCTCCTATC CGTCCGATCA AATGTTCCAG TAATTTAAAT CTTCACACCC 
    TTGTAGTTTT TGCTCTGTTT ACTTTCGCAA CTACCATTTT TTCTGTACCG 
    ATTACCAAGA GTAACTAATA ATAAACCATT CAAATTCATA CATGTTCCAA 
    GTCTAACCGG AAACAAATCA TAACCGGTTT TACCATTCCT ACTTTAGATC 
    TTACAATTAG CAATACAGTA GCAATGGAGA AGGCAGAAGC GTTAGTATTG 
    TATATGTTAT CATCTTTTCC TTGTAACATA AGCAATGAAA ACGTTTCCAA 
    ACAAGTCGTA AAAAGAACTT TCTGATAATC TT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5713959 [Map]; Strand: w
      • AT1G16710.2 - [+] show detail - histone acetyltransferase of the CBP family 12
        Distance: -260; Region: promoter
      • AT1G16710.1 - [+] show detail - histone acetyltransferase of the CBP family 12
        Distance: -330; Region: promoter
    Flanking Genome Sequence: GT15108 - 5-prime edge 
    CCTACTTTCT CCCTGCCCCC AATTAACTTT GACAGAGGTT CCTTGATGAT 
    TCGTATTCAG ACATAAGTAA CATAAGGTAA GTGTTATTTA ATGTGTCTTT 
    TGTTACTTAC AAAATCAAAA CCAAAAATCC CTAAATAGCC AAAAAAAAAT 
    AAATCAAAAT CCCCAAATCG AAGAATTCAG ACTTCTCTGA TTTCGAAATA 
    ATTTGTCGAT ATTTCAATTT CCTCGTCGTC TAGGTTTTGG AGGAATCTCG 
    TTCTGGGATT TATCTACGTA CTTGGGTTTG ATCCTATTTT TTATCCGGGC 
    TGGGGTGAGT TCACACGTGC GACATCGGCT GTTCAGCGAC TTTATGGCTC 
    CGTTCTACTT CGTTTTCAAG ATTCGATCAT CGTAATCTTT AGTAACGTTT 
    TTGGGGAAGA TTTTTTTGGC GGGGTTTGGC TCTTTGCGGC TGAAGTTTGT 
    TTCTTTGTGA GTCAATTTCA AGGTTATGGC TCCTCCGGTT GCCGGTTCCG 
    AAATGGTTAA CAATTTTGTT GGTTTGGCTA TGGGGTTTTA GTGGCTT

AT1G16710.1

Model type
Protein coding
Short Description
histone acetyltransferase of the CBP family 12
Curator Summary
Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides.
Computational Description
histone acetyltransferase of the CBP family 12 (HAC12); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: flower development, regulation of transcription, DNA-dependent, protein amino acid acetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 1 (TAIR:AT1G79000.1); Has 5603 Blast hits to 4159 proteins in 302 species: Archae - 0; Bacteria - 235; Metazoa - 1739; Fungi - 482; Plants - 447; Viruses - 18; Other Eukaryotes - 2682 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G16710.2

Model type
Protein coding
Short Description
histone acetyltransferase of the CBP family 12
Curator Summary
Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides.
Computational Description
histone acetyltransferase of the CBP family 12 (HAC12); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity; INVOLVED IN: flower development, regulation of transcription, DNA-dependent, protein amino acid acetylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 1 (TAIR:AT1G79000.1).
Link
InterPro Scan - TAIR