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Mutant Lines
GT15111

GT15111

CSHL Arabidopsis genetrap mutant lines

Original: GT15111

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15111

Determination of insertion point(s)

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT15111 - 5-prime edge
```
CTCTCCTCAC TGCCTATAAA ACCAATTCAT CTCACTCGA
```
5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT15111 - 5-prime edge
```
TCTCCTCACT GCCTATAAAA CAATTCATCT CACTC
```
5 prime edge [+] show sequence
1. Chromosome: 4; Position: 16838947 [Map]; Strand: w
  - AT4G35440.1 - [+] show detail - chloride channel E
    Distance: 0; Region: exon1 (CDS)
  - AT4G35440.2 - [+] show detail - chloride channel E
    Distance: 0; Region: exon1 (CDS)
  - AT4G35450.5 - [+] show detail - ankyrin repeat-containing protein 2
    Distance: -585; Region: promoter
  - AT4G35450.1 - [+] show detail - ankyrin repeat-containing protein 2
    Distance: -598; Region: promoter
  - AT4G35450.3 - [+] show detail - ankyrin repeat-containing protein 2
    Distance: -722; Region: promoter
  - AT4G35450.2 - [+] show detail - ankyrin repeat-containing protein 2
    Distance: -740; Region: promoter
  - AT4G35450.4 - [+] show detail - ankyrin repeat-containing protein 2
    Distance: -981; Region: promoter
Flanking Genome Sequence: GT15111 - 5-prime edge
```
ACTGCCTATA AAACAATTCA TCTCACTCGA CGAAGCTGAT TGAGGATGCT 
CACCACCAAA CCGCCGATAG GCGGAACAAG GATAACACGC AACCTATTGG 
AACCGATCGG GGCCTCTCTA AGCCACGAAG CTCCACGATC AGGAATCCCA 
TCCCAGGAAA AGTCTCGAAG CAAGTGAACA CAGTTGTTGA ATAGAACCAC 
ACTAACTCCA GTGAGAACAC CAACCAAACA AGCCGACGCT ATCGCAAGCT 
CCTGAGACGG CTGCTGATCA AATCCAACCT CATCCTGATC AGTCTCCTGC 
TTCGCCGCCG GTAAACGCGG GAAAATTCTA CCGCCAATAG CGACGGAACC 
GAAAAACGGT GAAAGGACGA CATTGAACTG AAAAGGAACG TCGGTTTTGT 
GAATTGGAGC GAATCTCCGG GAAGAGACGG GAGATCGGAG GGCAGCACAG 
AGTGGAAGCG TGGCTGCCAT GAACGGCTGC TTCCGTGAAG T
```

AT4G35440.1

Model type: Protein coding
Short Description: chloride channel E
Curator Summary: Enclodes a choride channel protein that is localized to the thlakoid membrane.
Computational Description: chloride channel E (CLC-E); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel F (TAIR:AT1G55620.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35440.2

Model type: Protein coding
Short Description: chloride channel E
Curator Summary: Enclodes a choride channel protein that is localized to the thlakoid membrane.
Computational Description: chloride channel E (CLC-E); FUNCTIONS IN: ion channel activity, voltage-gated chloride channel activity; INVOLVED IN: chloride transport, transmembrane transport; LOCATED IN: chloroplast thylakoid membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloride channel, core (InterPro:IPR014743), Chloride channel, voltage gated (InterPro:IPR001807), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: chloride channel F (TAIR:AT1G55620.2).
Link: InterPro Scan - TAIR

AT4G35450.1

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); INVOLVED IN: in 6 processes; LOCATED IN: integral to chloroplast outer membrane, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35450.2

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); INVOLVED IN: in 6 processes; LOCATED IN: integral to chloroplast outer membrane, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1); Has 85365 Blast hits to 29004 proteins in 1328 species: Archae - 144; Bacteria - 6951; Metazoa - 44906; Fungi - 6142; Plants - 3755; Viruses - 871; Other Eukaryotes - 22596 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35450.3

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); INVOLVED IN: in 6 processes; LOCATED IN: integral to chloroplast outer membrane, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1); Has 85365 Blast hits to 29004 proteins in 1328 species: Archae - 144; Bacteria - 6951; Metazoa - 44906; Fungi - 6142; Plants - 3755; Viruses - 871; Other Eukaryotes - 22596 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35450.4

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); INVOLVED IN: in 6 processes; LOCATED IN: integral to chloroplast outer membrane, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1); Has 85180 Blast hits to 28957 proteins in 1321 species: Archae - 144; Bacteria - 6924; Metazoa - 44765; Fungi - 6138; Plants - 3756; Viruses - 866; Other Eukaryotes - 22587 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G35450.5

Model type: Protein coding
Short Description: ankyrin repeat-containing protein 2
Curator Summary: Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.
Computational Description: ankyrin repeat-containing protein 2 (AKR2); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat-containing 2B (TAIR:AT2G17390.1).
Link: InterPro Scan - TAIR