1. Home
  2. Mutant Lines
  3. GT15116

GT15116

CSHL Arabidopsis genetrap mutant lines

Original: GT15116

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15116

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 121811 [Map]; Strand: w
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15116 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAATCAATA 
    TCACACTCTT CTTGCTACTA TCTCTCTTTG CTTTGTACAA AGCCAACACT 
    CGTCTTTTTG TTCTAATTTG CATCTGATAA TGTTGGCCTC GCTGATCATC 
    TTCGTTGCTC TTCTCTGCAA TGTGACTGTC ATAAGTGGCT TAAACGACGA 
    AGGCTTTGCG CTCTTAACGT TTAAACAAAG CGTTCACGAT GATCCTACAG 
    GTTCTCTTAA CAATTGGAAC TCATCAGACG AGAACGCCTG TTCGTGGAAC 
    GGTGTAACTT GCAAAGAACT CAGGGTGGTG TCTCTAAGCA TTCCAAGGAA 
    GAATCTTTAC GGTTCTCTCC CTTCGTCTCT AGGGTTTCTC TCCAGTCTCC 
    GTCACTTGAA TCTCCGGAGC AATAGGTTTT ATGGGTCGTT GCCTATTCAG 
    CTTTTCCACC TTCAGGGACT CCAAAGTCTA GTCCTTTACG GCAATTCCTT 
    TGATGGGTCA TTGTCGGAAG AGATCGGTAA GCTTAAGCTT CTTCAGACCT 
    TAGATTTGTC ACAGAATCTC TTCAACGGGT CGTTACCACT TTCGATTCTG 
    CAATGCAACA GACTTAAAAC ACTCGATGTC AGCAGAAACA ACTTGTCTGG 
    TCCTTTGCCT GATGGGTTTG GCTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 121868 [Map]; Strand: w
      • AT2G01210.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -22; Region: promoter
    Flanking Genome Sequence: GT15116 - 5-prime edge 
    TCCTACTTTA TCCCTGATAT TGATGGAGTG AGAGTAAAGT GAAAAAGATA 
    CTCTCGTGGA AGAAAAAGGA GAAAGAAAGA ATACAAAAAG TAGAGAGAAA 
    GAGAGAGAGA GCTCTGTTTT TGCATTGGGA GAAGAGAATT AACAAAAAAA 
    AAGAAATGCC CAAAGAAAGG GGTGAAAGTT GGAAAAAAAA AAAGGCCATG 
    GCAAAGTAAT CCATACCCTA ATTTGACCCC TAATCTAATG GGTTTGAATG 
    GTAACAAACT TAAGCTTTAT ACGGTTTTGA ATCAATCATA AAAACTTTTT 
    CAAAAATGTT ACAAAAGG

AT2G01210.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink).
Link
InterPro Scan - TAIR