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GT15122

CSHL Arabidopsis genetrap mutant lines

Original: GT15122

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15122

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23065172 [Map]; Strand: w
      • AT5G57000.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (CDS)
      • AT5G57000.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT15122 - 3-prime edge
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAGTTTCTGG 
    TAATTCCATC GAATTCTCTC ATCCTCGATT TGATTTTTTT CTCGTTCTTA
    GATTGATTTT GTGTTTATTC TGATTTTGAG ATGATATTTT TTTCTTCTGG
    GGTTTAATGA TGATTTATTG GTTTTATTGA AGTTATTTAA GGATCAATCA
    AATTATTGTT TTCTCTCCTG CGATTGATTG GTTTATGGTG AATGTATGAA
    TCTAATCATT GAGATTCTTA GAAGGCAATT TGTATATTAT CATTGAGTTC
    ATTGCAGAGT TTTTTTTTGG GGGGTTTTAC TGGTGATTTA TTGAGCTTAA
    TCAACGATGA TTTATGGTTA TGTTCTAGGA AATTAGTGTT TTTTGGGATG
    TGTTATATTG TAATGTTGAA CAACACTGTG GATTTGTTGT GTGTCTCATG
    TTATAAGATT TTTGGCTTTT GTTTGGTTGT TTAGGTGATG AAGATCGTTC
    GGACAAAAAG ATTCAGGGTG ATATTGATGA GAGTAAGGTC AAAGCACCAA
    ACATGTTCGA ACGAGCAAA

AT5G57000.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57000.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 141 Blast hits to 104 proteins in 24 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 8; Plants - 82; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link
InterPro Scan - TAIR