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GT15124

CSHL Arabidopsis genetrap mutant lines

Original: GT15124

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15124

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 187650 [Map]; Strand: w
      • AT2G01422.2 - [+] show detail
        Distance: 2916; Region: intergenic
      • AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
        Distance: 148; Region: intergenic
    Flanking Genome Sequence: GT15124 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAATTGTTAA 
    CCAGAAGTCC CTTATCATTT AATCTTGTTT GAAATAACAT AAGATACTGT 
    TTAGAAAAAT TATATCTCAG ATCATTATCA CAAAAGTCTA CTAAATTCAA 
    TTGTTGAGTT TATTACTCCC ATATTGACCC GTAAAATTTG TTCGTTGTAT 
    TGGTCTCTGT TAGAGTTTGC TCGCGGTAAC TAGGATGGGA CTCCAGCTTT 
    TTGGAGTTGT GGAAATCACG CGAATTTCTG AGTTTCTCTG AATTGGTGTT 
    TCTTCTTTCG TTTTCGCTAT AAACATTCGT TCTCCTCTTT TACTGTTTTG 
    TTATCATCTT TTTTTATAGA TTTTGATCTT TTTCCTTTTC TTGTGTTTCT 
    TGTAATTTCT GTCACAATTT CAAAAATGGT ATAAATACTT TACATTTTAC 
    CAAAAAATGT AGGGAGTGCT ACATTGTATA TAAACTAATT TTTAACTAAT 
    TAAATTCTAA ATGACATATG TTGATTTTTG GGGAAAAAAG AAAACTTGTG 
    TTCTTTGAAG ACAAATTATA GTTGCATTAA TGTTGTGAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 187705 [Map]; Strand: w
      • AT2G01422.2 - [+] show detail
        Distance: 2971; Region: intergenic
      • AT2G01430.1 - [+] show detail - homeobox-leucine zipper protein 17
        Distance: 93; Region: intergenic
    Flanking Genome Sequence: GT15124 - 5-prime edge 
    TTCATCCTAC TTTCTCCCTG TTAACATAAT AATAATAATA TTTACAAAGC 
    GGAACAGAGT CTCTTAGTAT TTACACGAAA TCATGTGATC GTTAATATTT 
    TGTAGGCTCA ATAGCAGACC TTCGTTGACT TCTAAACCAT ACTCAAATAA 
    TTAAGATACA CAAATCAACG ATCACGCTCT TGCGGCGGAA ACGTTTTCTT 
    AGCCGGAACC GGCACCACCG CCCTCGAAGG GCTCGCGGCA GGGGTAACTC 
    GCTCGCAGCG AGGACACATA GTAAGGCTCG AGGCAGAGTT CACCGTTGTT 
    GGGCCAACCT TCATCTCACT CGA

AT2G01422.2

Model type
Other RNA
Link
InterPro Scan - TAIR

AT2G01430.1

Model type
Protein coding
Short Description
homeobox-leucine zipper protein 17
Computational Description
homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink).
Link
InterPro Scan - TAIR