1. Home
  2. Mutant Lines
  3. GT15151

GT15151

CSHL Arabidopsis genetrap mutant lines

Original: GT15151

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15151

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 103867 [Map]; Strand: w
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT15151 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACTTTT 
    GGTCTATGGT TATAATGAAC TTTTAAGACT TTGTAAATGT GCTTCTTATA 
    TGAATGTCTC TCTACTCGTA ACCAGAGTTA TTACAAAACA AAGAAACACA 
    CAACAGAATG TGGGAGATTG TTAGCTATCA TACCAATTGA ATTTTTACAT 
    GTTGTGGTTA CTACTAACTA CTGTCCCAAT TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 103870 [Map]; Strand: w
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT15151 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACT 
    TTTGGACTAT GGATATAAGG AACTTTTAAG ACTTTGTAAA TGTGCTTCTT 
    ATATGAATGT CTCTCTACTC GTAACCAGAG TTATTACAAA ACAAAGAAAC 
    ACACAACAGA ATGTGGGAGA TTGTTAGCTA TCATACCAAT TGAATTTTTA 
    CATGTTGTGG TTACTACTAA CTACTGTCCC AATTTCATCC TCACTCGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20168931 [Map]; Strand: w
      • AT5G49665.1 - [+] show detail - Zinc finger (C3HC4-type RING finger) family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT15151 - 5-prime edge 
    CTTTCTCCCT GTTTACGAAA TAGTCGGCAA TACAAGGGAA ATGAAATGCG 
    TGTGAACACT CGGCCGTATA CTTCGCCGTT CCTTGCCCTG TTTTCACACT 
    GTTCAAACAT ATTCCACAAG TACTCTGCAA AAAGTTAACC AACCATCAAA 
    AACATGCCTT TATAAGTTAT TTTTATCTCT TTGTTGCTTA ATATGTTTCT 
    TACTCTGAAT TTGAAGCTGT TGCGAAACAG AGAGAGTTTT AACGGTGACC 
    GAGGCGAAAA AGGGTTAGAG ATAGCGGCCA AAGACAGTCT TGGACTCTTA 
    GTCGCCGATC TTGGCGTCAA AGTTTGTTCC GCCGTGGGAG TTTGAGCATC 
    TGCAGTCCGA CAACGTAGGC TAGGACTAGA AGTTGATCGG GGAGTTGAAG 
    GATTACTTCC TCCGGATAGA AAAGCTAGCT TAACGCAGCT TCTTGGGCTA 
    GGACTTGGGG TAAGATTATA GCCGGTGCGT TGCTTGTCGA GATCCGGCGC 
    CGCGGCATCG CTGTTTCTAG GGGCGGTGGT GCAAAAGGCT CGTCGCCATT 
    CGCCAACCAG TACCCATTGG TGTATATTAT TAATCTTGGG TTGTTTTGGT 
    TTTCAAGATG GAGAAAGTTT TAGAAAAACA AGAAAAAGGA AGAAGATAAA 
    GATTGAAAGA TTTTGGC

AT4G00238.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00250.1); Has 934 Blast hits to 678 proteins in 131 species: Archae - 0; Bacteria - 25; Metazoa - 209; Fungi - 135; Plants - 261; Viruses - 3; Other Eukaryotes - 301 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G49665.1

Model type
Protein coding
Short Description
Zinc finger (C3HC4-type RING finger) family protein
Computational Description
Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G22680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR