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GT15153

CSHL Arabidopsis genetrap mutant lines

Original: GT15153

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15153

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 17439157 [Map]; Strand: w
      • AT5G43415.1 - [+] show detail - transposable element gene
        Distance: -931; Region: promoter
    Flanking Genome Sequence: GT15153 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACCT 
    ATGCGGGACC CAAGACGGCT ATACATTTGC AAATTCTGAT TGTTATTATA 
    TTTGTTTCGG TTCGTGAATG AAGACTGCTA TAAGAGTTGC AGTGTGTTTT 
    GGTGACCCCA ATCTCAAGAT ATCACTCATA CTCACTCACA CACACACACA 
    CACACTCATC AAAAGAGATT CTGATTCTTA TTCACTCTCA TCCACATAAT 
    GGTTTTATTT TTCATTTCCA TACAAATGAA TGTTTTAATA TGACTTTTAT 
    TATTTTCTTT TGGTTTTGTA GATTCATCTC CCCCTAAGAT GCAAGAGAAA 
    CGGCATTCTG TCATTTCATT ATATGATCAA AATAATTCTA AAGTACGACT 
    ACTAGTATTA CCTTTATGTT AGTTCAATAA ATATTATTAC ATCCTCTGAC 
    ATTGTAAATA TGTTTACACT AGGATTTAAC TAAACCGCGG GCAATCGGTT 
    TATTTGATTC TTATACTAAA TATTTGAATT AATTTGATAT CCTAAACTTA 
    TAAATATAAA TTTCTAATGA TTAGTGAAGA ATCATAATAT ATGATTTGGA 
    TATTATTGAT TATTGATTAT TGATTTCGTG ATTGAATATA GTGTTTTTAG 
    GGATGGAATA TGATCATATT TTGATTTCAA AACAACATAG ATTCCTTGTT 
    TTCGTTG

AT5G43415.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 6.5e-36 P-value blast match to GB:NP_038605 L1 repeat, Tf subfamily, member 30 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR