Home
Mutant Lines
GT15157

GT15157

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT15157

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 5; Position: 26874526 [Map]; Strand: w
- AT5G67360.1 - [+] show detail - Subtilase family protein
  Distance: 0; Region: exon1 (5UTR)

ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
AATTTAAACA CTCTCTCGTC TTCTCCTTCG ATCCAGAGAG AGACACAACA 
CACCATCTCA ATCATGTCTT CTTCGTTTCT CTCCTCCACT GCTTTCTTCC 
TCCTCCTTTG TCTAGGATTC TGCCACGTGT CCTCTTCCTC CTCCGACCAA 
GGAACTTACA TCGTTCACAT GGCTAAATCT CAGATGCCGT CGTCTTTCGA 
CCTCCACTCT AACTGGTACG ATTCATCTCC TCTCAACTAT CTCCGACTCA 
GCCGAATTGC TCTACACTTA CGAGAACGCG ATTCATGGAT TCTCAACACG 
GCTAACTCAA GAAGAAGCCG ACTCGCTCAT GACTCAACCT GGTGTTATCT 
CCGTTTTACC GGAGCACCGT TACGAGCTAC ACACCACTCG TACTCCTC

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 409582 [Map]; Strand: w
  - AT5G02080.1 - [+] show detail - DNA / pantothenate metabolism flavoprotein
    Distance: -229; Region: promoter
Flanking Genome Sequence: GT15157 - 5-prime edge
```
TTTCTCCCTG ATCTCAGGTA CTTTCTTGAT ACAAATAAAA CTAAAAGCGT 
ACAAGTGTGA GTTTATCAGA AACAGATGTC CATAGTTGCA AAAATATAAA 
CTTTGTGATT ATATGGGCCG TTTCTAAGGC CCAATTAGAA TAGCTTGATC 
ATCAAAAGCC CAACAAGTTT TGTT
```

AT5G02080.1

Model type: Protein coding
Short Description: DNA / pantothenate metabolism flavoprotein
Computational Description: DNA / pantothenate metabolism flavoprotein; CONTAINS InterPro DOMAIN/s: DNA/pantothenate metabolism flavoprotein, C-terminal (InterPro:IPR007085); BEST Arabidopsis thaliana protein match is: 4-phospho-panto-thenoylcysteine synthetase (TAIR:AT1G12350.1); Has 1189 Blast hits to 1160 proteins in 540 species: Archae - 65; Bacteria - 597; Metazoa - 129; Fungi - 134; Plants - 69; Viruses - 5; Other Eukaryotes - 190 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G67360.1

Model type: Protein coding
Short Description: Subtilase family protein
Curator Summary: Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.
Computational Description: ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR