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Mutant Lines
GT15159

GT15159

CSHL Arabidopsis genetrap mutant lines

Original: GT15159

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15159

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 8046670 [Map]; Strand: w
- AT2G18540.1 - [+] show detail - RmlC-like cupins superfamily protein
  Distance: -1662; Region: intergenic
- AT2G18550.1 - [+] show detail - homeobox protein 21
  Distance: 2993; Region: intergenic

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGT 
TGCACAAGCT GTGGAATACA ATTTATGAAT TTTATATGGA AAAAGAGGAA 
AACTTAATAT ATGTGAAAAA AGAAAGAAAG AGAAAAACGA TCCTATTTGT 
TGCGATTATG TATTATTTAG GCCCATTTAT ATCTTAGCCA ACGGCCCATT 
GAAAAACTGT CTCATATATT ATTTAATAAG AGTATAGAGA GCCACATTAT 
TTTGGGTCAA AATTGAGTAA ATGACTTTGA TGACCTGATA ATATTAGAAG 
CTATTTTTCC AAATAACGAC TATGTATTAG AGAAATAACA TAGTGTATAC 
CGAATAACGA TCGAATTTTT ATGCTTAAGT CATGCTCTAC TTGACTTAAA 
TCGAATTTTT ATGCTTAAGT CATGATTAGT GTTAATTTTA AAGAAACATG 
ATTATCTACA TATACATTTT TGCAGCCATT TTGTGAAATA AATTCTGAAG 
TTGTAACTTA TTTACAATGG CTGCCACTAA CTTTTAATTA TTGATTTTCT 
TTTGGCAATA AATTGATTAA CAAACAAAAA ATATTTCAAA TATATTCCAA 
TCCCATATAT CACGCAAATT TCTCCAAAAT TTGAATTAGA TTTCGGAAAC 
TATTTAAAAC AAAAAATATT TGACAAACCA AAATACAATT GCAATCCCTT 
AAAATGAGCA AA

3 prime edge [+] show sequence

Chromosome: 2; Position: 8046656 [Map]; Strand: w
- AT2G18540.1 - [+] show detail - RmlC-like cupins superfamily protein
  Distance: -1648; Region: intergenic
- AT2G18550.1 - [+] show detail - homeobox protein 21
  Distance: 3007; Region: intergenic

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTTGCA CAAGCTGTGG 
AATACAATTT ATGAATTTTA TATGGAAAAA GAGGAAAACT TAATATATGT 
GAAAAAAGAA AGAAAGAGAA AAACGATCCT ATTTGTTGCG ATTATGTATT 
ATTTAGGCCC ATTTATATCT TAGCCAACGG CCCATTGAAA AACTGTCTCA 
TATATTATTT AATAAGAGTA TAGAGAGCCA CATTATTTTG GGTCAAAATT 
GAGTAAATGA CTTTGATGAC CTGATAATAT TAGAAGCTAT TTTTCCAAAT 
AACGACTATG TATTAGAGAA ATAACATAGT GTATACCGAA TAACGATCGA 
ATTTTTATGC TTAAGTCATG CTCTACTTGA CTTAAATCGA ATTTTTATGC 
TTAAGTCATG ATTAGTGTTA ATTTTAAAGA AACATGATTA TCTACATATA 
CATTTTTGCA GCCATTTTGT GAAATAAATT CTGAAGTTGT AACTTATTTA 
CAATGGCTGC CACTAACTTT TAATTATTGA TTTTCTTTTG GCAATAAATT 
GATTAACAAA CAAAAAATAT TTCAAATATA TTCCAATCCC ATATATCACG 
CAAATTTCTC CAAAATTTGA ATTAGATTTC GGAAACTATT TAAAACAAAA 
AATATTTGAC AAACCAAAAT ACAATTGCAA TCCCTTAAAT

5 prime edge [+] show sequence

Chromosome: 2; Position: 8046728 [Map]; Strand: w
- AT2G18540.1 - [+] show detail - RmlC-like cupins superfamily protein
  Distance: -1720; Region: intergenic
- AT2G18550.1 - [+] show detail - homeobox protein 21
  Distance: 2935; Region: intergenic

CTTTCTCCCT GTGTGCACTA ATTTTGCGAA TGATTAAGAA ACCCAAAAAA 
ATGTAAAAAC ACTACTAAAA ATCAAGTTCT TTTGGTTAAA CATTACTTTC 
TATCTCTTAT ACATAAGAAA AATATGACCA ACCTTTTTAA CAGCATCAAT 
CCATGAACCA TGATATCTCG ACACATATTA TTCTATACTA AAATGCTAAG 
ATTGAATCTG CTTGAACTAT AAAAAGTGTA CAAATCCAAT CTATGTTTCT 
TAAAATTACA CCAATCACAC TCTTTTTTAT CTTTTATCGA TTCCGCTTTT 
TGTTTCCAGT AAGTTGTTAC CAATGTTTCT TAGTTAGTTC ATGGTTTGAC 
AGAATCTGAA CTTAACGAGA GCACATTAGG TGTGGGGGTC AGTCAAAGTA 
TATCGAAAGT TTTGTTTTTA ACTTACAAAC TATAGTGTAT TTACTATCTA 
GGGATATAAA GTTAGGCCGA TTTCTTCTGA TAAATAACTA AAGTGAGCCA 
TGAAAAATGA TGGATGGGAA GTGAAACTGA TATTTCATGT GAGCTTCCTA 
GATATTGAAA TTAAAAAGAG ATTGGAGTTA TTG

5 prime edge [+] show sequence

Chromosome: 2; Position: 8046727 [Map]; Strand: w
- AT2G18540.1 - [+] show detail - RmlC-like cupins superfamily protein
  Distance: -1719; Region: intergenic
- AT2G18550.1 - [+] show detail - homeobox protein 21
  Distance: 2936; Region: intergenic

CTTTCTCCCT GTGTGCAACT AAGTTTGCGA ATGATTAAGA AACCCAAAAA 
AATGTAAAAA CACTACTAAA AATCAAGTTC TTTTGGTTAA ACATTACTTT 
CTATCTCTTA TACATAAGAA AAATATGACC AACCTTTTTA ACAGCATCAA 
TCCATGAACC ATGATATCTC GACACATATT ATTCTATACT AAAATGCTAA 
GATTGAATCT GCTTGAACTA TAAAAAGTGT ACAAATCCAA TCTATGTTTC 
TTAAAATTAC ACCAATCACA CTCTTTTTTA TCTTTTATCG ATTCCGCTTT 
TTGTTTCCAG TAAGTTGTTA CCAATGTTTC TTAGTTAGTT CATGGTTTGA 
CAGAATCTGA ACTTAACGAG AGCACATTAG GTGTGGGGGT CAGTCAAAGT 
ATATCGAAAG TTTTGTTTTT AACTTACAAA CTATAGTGTA TTTACTATCT 
AGGGATATAA AGTTAGGCCG ATTTCTTCTG ATAAATAACT AAAGTGAGCC 
ATGAAAAATG ATGGATGGGA AGTGAAACTG ATATTTCATG TGAGCTTCCT 
AGATATTGAA ATTAAAAAGA GATTGGAGTT ATTGCTTCTT TGCCACCGGC 
CACCGCTGCA AGGTTTTAAC ACCCAATACC ATTCCCTAAA CACACATTAA 
ACTCTTAAAA ATCATTTTCT CTGTCAAATA AACTTGATGG CCTCAACATA 
TCCCCTTCTC ATTAATTTTA GCCAAAACCA ATTAAAAAAA TTTTCGATGT 
TTGGTGTTCC GTTTTTATTA GGTTGCATAT CCACAATGAA AATT

AT2G18540.1

Model type: Protein coding
Short Description: RmlC-like cupins superfamily protein
Computational Description: RmlC-like cupins superfamily protein; FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT4G36700.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G18550.1

Model type: Protein coding
Short Description: homeobox protein 21
Curator Summary: Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.
Computational Description: homeobox protein 21 (HB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 40 (TAIR:AT4G36740.1); Has 7525 Blast hits to 7522 proteins in 427 species: Archae - 0; Bacteria - 0; Metazoa - 5302; Fungi - 235; Plants - 1881; Viruses - 3; Other Eukaryotes - 104 (source: NCBI BLink).
Link: InterPro Scan - TAIR