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GT15186

CSHL Arabidopsis genetrap mutant lines

Original: GT15186

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15186

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8868472 [Map]; Strand: w
      • AT2G20590.1 - [+] show detail - Reticulon family protein
        Distance: 0; Region: intron2 (CDS)
      • AT2G20590.2 - [+] show detail - Reticulon family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT15186 - 3-prime edge 
    TTTTACCGAC AGTCTAAGCT TGCTTTGCCA AAGGAGTCAA CTTTAGGTAC 
    CAAATCTCTA GCTTGTGTTT GTAGGCTCAA TTAGATTTGT GAAAGTCATG 
    ACCTTTTTCT TTGTTTTGAA GCGTTTTCTC GGCGGTTTCC AATCTCGGAC 
    TTGTGTTACT TTGCGGGTCC TTCTTGTCAA ACACTCTTTG TCAAAGGTAC 
    ATTTACTTCT GTGGTCTCTT TTGTTTGTCC TTCTCCAGAA GGTAATAGTT 
    AGTGTGATCC TTCAACGTGT TGTTACTTTT AGGAAAAATG AAGACACAAA 
    GAGAGTGTTC CATGTGAGTG AAGATGATGT CTTGCGTTTA GCGAGACGAG 
    TGCTTCCTGC AACCAACTTT TTGATCTCTA TGACTAGTGA GCTTTTTTCA 
    GGAGAACCAT CAATGACACT CAAAGTAAAC AAAATCAAAT CAGTTTTGGT 
    GATTGCTATA TGTGGTGGTT TACTTGCCCT TTCATCTGCT GTTTTTCTTT 
    TTGTCACAGG TGACACCATT TCTGCTACTG GGAGCTGAGT ATGGTCATCT 
    CATAACACTG TGGAGGCTAT CTGCATTTGG TAATTAACAT TTGGAACATA 
    AGCTGAAACA TTGTTAAGCA TGATAGGAAT TGTGATGATG ATATGTGTGT 
    ATGGTTACTG AAACAGGTTT CTTCCTCAGT TT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8868704 [Map]; Strand: w
      • AT2G20590.1 - [+] show detail - Reticulon family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G20590.2 - [+] show detail - Reticulon family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15186 - 5-prime edge 
    ACCCAACACA CAAGCAAATC AGAATTAAGC GGAGAAACAC ATAGAGCAGA 
    TAATAAGAGA AAGAAGAGTA CTTGGAAGAT CTGAGGAAGA ACAAAGAGGA 
    GGAGCTGAAC TTTGCTTATC CTTCTTAGGT CGACCATTAG TCTTCCGCTT 
    TCTAGGAGGA AGCTTTACGA TTTCTTCGAT AACCAAATTA GCTTCTTTCT 
    CTTGCACAGC TTCAGATGTT GGCCTCGATG TGCGGGGATT CCTCGGAGAT 
    GCTAAAAGAC TCTTTTGCCC TCCTTTCCCT TTGCCCCGTT TCCGAAACAC 
    CGCCATAGCA TCTTCAGAAG TCATTTCGAG TCGAGCGGAT AAACGGGTCC 
    TCGATTTTCG AAGTGGAGAA GGAGGTAAGA GGAGGATATC GCGAAGAGGA 
    ACAGGTGATG ATGGGGTTGG AGTATTGGGA GACGATAG

AT2G20590.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT4G28430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G20590.2

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT4G28430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR