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GT15187

CSHL Arabidopsis genetrap mutant lines

Original: GT15187

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15187

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 206375 [Map]; Strand: w
      • AT1G01570.1 - [+] show detail - Protein of unknown function (DUF604)
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT15187 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATATGTG AGTGCCGAGA 
    TTATCGCCAT ACAAAATATA CATTTTACTA AAATTACATA AATGTTTTCA 
    GTTTTATTAT GATGTGTTAT ATACATAAGT CTTAATAAAA CAAAAAAAAA 
    CAAAAAATCA GAATGCACTA ATAAAATAAA TGATTTGTAA TGGCTTTTGC 
    ATTTGGCATC TACTAGAAGA TATGAGTGAG TTAATGAAAA ATATGGAAGT 
    TTGATTAAAG ACTTTGCCTA AAATAATAAT AAATGCATTT TTAAGTTATT 
    CTGTTTCCTA AACAAAACCT AGCTAAAATC TTGACCCTTC AAACATTAAA 
    ATAAAAACAC TCTATGAAAA CTGAAATAAA ACTTAAGTTT TCACCCAAAA 
    AAAGGACAAT GTAGGAAAAA TCTTCAAATG GAAATTAAAT TTAATTGAAG 
    GAAAATAAAA TAAAAACCCG AGGACTAACC TGATGGAAGC CAACTTCCTT 
    AGTCAAAGGA ACACCGAGTT CCGACATACA AGCATGAATC CGATCATCGG 
    AGCCGTACAA TTCCAAATAT CTCTGAATAC AACGATCTTG CATTTTCTCT 
    AATGCTTTAG CCAACGGATA GCTAATCGCG AACCCTCCTC CTCCATAAGC 
    CATCCC

AT1G01570.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF604)
Computational Description
FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: fringe-related protein (TAIR:AT4G00300.1); Has 558 Blast hits to 547 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 169; Plants - 281; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR