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GT15200

CSHL Arabidopsis genetrap mutant lines

Original: GT15200

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15200

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16401028 [Map]; Strand: c
      • AT3G44920.1 - [+] show detail - cation/H+ exchanger 11
        Distance: -1303; Region: intergenic
      • AT3G44930.1 - [+] show detail - cation/H+ exchanger 10
        Distance: 1030; Region: intergenic
    Flanking Genome Sequence: GT15200 - 5-prime edge
    CCTACTTTCT CCCTGTTGTT GATAATGAGG CAAAATCAGA AATATCATAG 
    GAGCTGGGAT CAGGAGTCGA AAGATGAGAT TCTCTCTCCA TCTTCTATAT
    CTCGCTAAGG TTTCTGTTCA AAGTTTGACA GTCATCCTTT TAACCCACTT
    AATAATCTCT TAGAAAACAA GCAGCCCTAA CTTGAGCCAC AATACAACGT
    CTAGGGTTCA TCCGTCTTCA CGCAACCCCA ATATGCCTCT ACAGCTCTAC
    TCATCCTTCT AACCCACTTA ATAATTTCTT AGAAAACAAG CAACCCTAAC
    TTGGGCCACA ATTCAACGTC TAGGATTCAT CCGTCTTCAA TATGCCTCTA
    CTCCCTTGCC GATCCAGTCG TGGGCCTCGT GGCCATCTAG AGTCTAGACA
    CACAAATGCA TTAAATTTGA AAAGAAAAAT CACACAAAAA GACATCCATT
    AGAAAATCAA ACACATCACG TTATTGTGCA CAGCACATTG ACATATATAT
    CTGTCTGTGC CTTCCTCTTT CGCATATGAT TGACGTCTCC TTCTCATCTC
    ATTCACATCT TCGAAGGTTC AGATTGAGAT TGATCTAAAG ATCTAAACCT
    AAGCAAAAGG ATTCCAAATC AGCTCAACTT AATTGCGACT CGAGGAGCTA
    CGAGAAGAAC TCGGTTTCCT TC

AT3G44920.1

Model type
Protein coding
Short Description
cation/H+ exchanger 11
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 11 (CHX11); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 10 (TAIR:AT3G44930.1); Has 2197 Blast hits to 2179 proteins in 766 species: Archae - 96; Bacteria - 1401; Metazoa - 0; Fungi - 111; Plants - 516; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G44930.1

Model type
Protein coding
Short Description
cation/H+ exchanger 10
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 10 (CHX10); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 11 (TAIR:AT3G44920.1); Has 3267 Blast hits to 3245 proteins in 1126 species: Archae - 161; Bacteria - 2335; Metazoa - 0; Fungi - 113; Plants - 528; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).
Link
InterPro Scan - TAIR