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GT15201

CSHL Arabidopsis genetrap mutant lines

Original: GT15201

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15201

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2926945 [Map]; Strand: w
      • AT3G09530.1 - [+] show detail - exocyst subunit exo70 family protein H3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15201 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCTCC CTACTCACAT GGCATCTTTT 
    TCGCCTTGGA TGAGCTTATT TTCTCTACTC CGAGACGGTA AATCGATTCA 
    TCAACTATCG ATTTTCGAAT GGATTTATAA GTAGTCGCAC ACTCTTTCGC 
    ATAACCCGCA GCGATCATGC AATCTGCTAT GGATTTCATC TCTGTCCACG 
    AGTTCTTTGA CACCTCCTCA ACTTCGATGA TGGAGTCACC AGCTGAACGA 
    GACTCGTGCC AAACATCATC ATCGTTCGAT ACGACAGATG TAGGAGATCT 
    AGAGGAGATG GATTCAGGAT CCAAATGCGC ACGGTTCATT GAAAGAATCT 
    GGAGAAACTC TTTCTGAAGT CGTTTCATAG CGATCTGCAT CAGATTCTGA 
    GCTCTAAGGA GTTTCTCCGA ATTTGGATCT TCTCTAATCA ACAAATCCAT 
    GGCGTTCTGC AGTTCCTTCA CGCGTTTAAC AAACTTCTTC TC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2927020 [Map]; Strand: w
      • AT3G09530.1 - [+] show detail - exocyst subunit exo70 family protein H3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15201 - 5-prime edge 
    TCCTACTTTC TCCGAGGTTG TTGAGTTGAA GATGATAGGT GGATAGAGGC 
    GGTTAAGGTC TCGATGAAGA CTCTCTTCAA TGGCGAAAAG ACTCTATGCG 
    ATGAAATCTT CGAATCCTCT GTTTCTCTTA GAGAGTTTTG TTTCCGAGAC 
    ATCTCCAAGG AAGGAGCTCT TCTTCTGTTT GGATTCCCGG AAACTATCAC 
    CTTAAGAGAC AAGAAAAATC CAAATCCGGA GAAGATTTTC CCGTTGCTAG 
    ATATGTATTG CACGATCACA GATAACTTGC TTGCGATTGA AGCAATCTTC 
    TCGTTTCCAT CAATTTCGAA TGTTCGAACT CAAGCTCACA GCTCACTTAG 
    CCGACTAAGC GAGTCAATTC TTGCTCACTT GATGGATTTT GAATCTCAAA 
    TACGTAAAGA CTCGTCCAAG ACAGTGGTTC GTGGTGGAGG AGTTCATCCG 
    ATGACTATCT CCGCCATGAA TCACATCTCT CGACTCGCGG AATACAGTAA 
    CGCTCTCATT AATATACTCA AGGGATCATC ATCATCATCT TCCGCTAAAG 
    CATTGCTTCC TAAATCTTAC TTCAATGTCT CAAAATCTGA A

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT15201 - 5-prime edge 
    TCCATCCTAC TTTCTCCGAG GTTGTTGA

AT3G09530.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein H3
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein H3 (EXO70H3); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H4 (TAIR:AT3G09520.1); Has 786 Blast hits to 774 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 29; Plants - 616; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR