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Mutant Lines
GT15205

GT15205

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT15205

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 2787273 [Map]; Strand: w
- AT5G08600.2 - [+] show detail - U3 ribonucleoprotein (Utp) family protein
  Distance: 0; Region: exon3 (CDS)
- AT5G08600.1 - [+] show detail - U3 ribonucleoprotein (Utp) family protein
  Distance: 0; Region: exon3 (CDS)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGC 
TATAGCACCA ACGGTAGAGT ATCCAACATT GACATCTTGG TTAAAGTAAA 
TAGTTGGTGC CTCTCTGTTC CTTTTTACCA GAGGCACCCA AATATCAAAC 
CCCTTGTAAA CCAGTTCATT CGCTACATCC CGTTCCAGTC TTTCTTGTTC 
TGGCTTTGGC AGAGGAGCAT GAACAAGAGA CTGCGTATCT TTTCGCATCC 
GGGAGATCAT ATTGCTTAGT TGGCTATTTC CATGTAATCC TTGAAGAGGC 
TCCATAAAGT CATCAATTGT GGTGAGGGAT TTACCCTCCA GAACATCACG 
GGTAGGATTG AATTCAGACT CTGGATATGG TTCAGTAAAG ACTACACGTT 
TGTTCTTACT CTCTCCTGAA AAAAAAA

AT5G08600.1

Model type: Protein coding
Short Description: U3 ribonucleoprotein (Utp) family protein
Computational Description: U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT4G02400.1); Has 7611 Blast hits to 5651 proteins in 499 species: Archae - 10; Bacteria - 906; Metazoa - 2522; Fungi - 1145; Plants - 309; Viruses - 73; Other Eukaryotes - 2646 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G08600.2

Model type: Protein coding
Short Description: U3 ribonucleoprotein (Utp) family protein
Computational Description: U3 ribonucleoprotein (Utp) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: small-subunit processome; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp14 (InterPro:IPR006709); BEST Arabidopsis thaliana protein match is: U3 ribonucleoprotein (Utp) family protein (TAIR:AT4G02400.1).
Link: InterPro Scan - TAIR