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GT15207

CSHL Arabidopsis genetrap mutant lines

Original: GT15207

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15207

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16596752 [Map]; Strand: w
      • AT2G39795.1 - [+] show detail - Mitochondrial glycoprotein family protein
        Distance: -235; Region: promoter
    Flanking Genome Sequence: GT15207 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATATCT 
    CATGAATACT AAGAGCGAAA CATCAACTAA AATTCGTTAT TTCCTGGCTA 
    TGGTGGATCG ACAATTTGGA AAGAAAGTGA GAACTATACG CAATGATAAT 
    GGAAGTGAGT TTATCTCACT AAGCACTTAT TTCTTGGAAA ATGGAATTCG 
    TCATTATTAG GGGCCGGTTT GGCTCGGTTC TCTTTAGTTA CTCTTCGCAT 
    AATCATCTAC AAAAATACTC TAGGCTTAAG TTGCTATTTA GTCACTTTTT 
    CAAACTTAAT TGGAAAAGTA GTCACTTTAC TATTCATA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9245331 [Map]; Strand: c
      • AT5G26340.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT15207 - 5-prime edge 
    ACCGTTACCG ACCGTTTTCA TCCCTACATG CCTACGTCTT ATATAGTCGC 
    AAACAAAATT TTCTCCGGCA TTGACTTTTA ATGCGTTATG AGGATCTGTC 
    ACCTGTAATT AATGGGCTTA CGTGTAGGCC CATAGCGGAG TTAAAAACTG 
    GCCCACTAAA TAAATTTTGA AATGTTCCCA GGATTAAAGG AGGTTGGGGA 
    TGGAGGTTAT CGCTAGGTCT GGCGGGAATT CCCGCGCTTC TTCTAGCGGT 
    CGGAGCTTTA TTGGT

AT2G39795.1

Model type
Protein coding
Short Description
Mitochondrial glycoprotein family protein
Computational Description
Mitochondrial glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 404 Blast hits to 404 proteins in 130 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 117; Plants - 220; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G26340.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Curator Summary
Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.
Computational Description
MSS1; FUNCTIONS IN: carbohydrate transmembrane transporter activity, high-affinity hydrogen:glucose symporter activity, sugar:hydrogen symporter activity, hexose:hydrogen symporter activity; INVOLVED IN: response to salt stress, apoptosis, phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR