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GT15211

CSHL Arabidopsis genetrap mutant lines

Original: GT15211

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15211

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 103851 [Map]; Strand: w
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT15211 - 3-prime edge 
    CCGACCGTTA CCGACCGTTT TCATCCCTAC TTTTGGTCTA TGGTTATAAT 
    GAACTTTTAA GACTTTGTAA ATGTGCTTCT TATATGAATG TCTCTCTACT 
    CGTAACCAGA GTTATTACAA AACAAAGAAA CACACAACAG AATGTGGGAG 
    ATTGTTAGCT ATCATACCAA TTGAATTTTT ACATGTTGTG GTTACTACTA 
    ACTACTGTCC CAATTTCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 103928 [Map]; Strand: w
      • AT4G00238.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: GT15211 - 5-prime edge 
    CTTTCTCCCT GACAAAAGGC TAGTTAGACA ACTTAGCTAA TTCATTACAA 
    CCATCGACCA AAAGGCTTGT TAGACAAAGC TAATTCTCAC ACGAGAATCC 
    AAAGTCCTAA AAGTTCATTA GAGTAGATAG AAAGATGAAG CCTAAGATAG 
    ATAACAAAAT AAGGCATTAC ATCTTCATTA AACCCGAGAT TAAACGGATA 
    AACATATACA ATCCAATAGC TTCCTCTTCT TCTTCTTAGT TGGTTTGAGT 
    AAGCACTGAA GTCACCTCCT TCAAAACATC CATGTTCGCC AACAACAACT 
    CACATTTCTT AGCATCCACA AGCTTCTATC TTCTCTTGAA TCCTCTTCTT 
    AGTCTCCACG GACACCTTGC TCCACTTCTT CTTCACAGAA TACTCATCCA 
    AACCGAGACT AGCGATAACC GGAACAAGAA AAGACTCCTC AAACCACTCC 
    GAATCTTCTC CAAGAATCAC GACTTGCTCA TCTTCTTTAA CAA

AT4G00238.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00250.1); Has 934 Blast hits to 678 proteins in 131 species: Archae - 0; Bacteria - 25; Metazoa - 209; Fungi - 135; Plants - 261; Viruses - 3; Other Eukaryotes - 301 (source: NCBI BLink).
Link
InterPro Scan - TAIR