1. Home
  2. Mutant Lines
  3. GT15212

GT15212

CSHL Arabidopsis genetrap mutant lines

Original: GT15212

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15212

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 187807 [Map]; Strand: w
      • AT4G00430.1 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: -180; Region: promoter
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: -180; Region: promoter
    Flanking Genome Sequence: GT15212 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATA TTGGTTCAGT TCATTTGACT 
    ATCAGATTAT TTGCCTAAGC CTTGAGATTA GGTGTGAACT ATACGTTATA 
    CGAGTTGAAA CTTGAAATAA AGAAAAAACT ATAAGTTATA CTATTTTATT 
    TTCTTAGCAA TAACTAAAAA TAAATGTTTG GAAACGTTAG GCAATTTTAT 
    TATATTCTAT CGTTGTTCTC TATAAATGAA GTCTCGACCA CACACTAGGT 
    AGCTACACAC GAGAAAGAAA AAGCTCACAA CTTTAACCTT TCTGGAGAGA 
    GAAGAACAAA AGAGGGAGAG GGAGAGAAAT GGAAGGCAAA GAAGAAGATG 
    TACGAGTGGG AGCTAACAAG TTCCCGGAGA GGCAACCCAT CGGTACATCG 
    GCTCAGTCCA CCGACAAGGA CTACAAAGAG CCACCTCCTG CGCCACTGTT 
    CGAGCCCGGC GAGCTCAGCT CATGGTCTTT CTACAGAGCC GGAATAGCTG 
    AGTTTATCGC TACTTTCTTG TTTCTCTACA TCACTGTTTT GACTGTAATG 
    GGAGTTAAGA GAGCACCAAA CATGTGTGCT TCTGTTGGAA TCCAAGGTAT 
    CGCTTGGGCT TTTGGTGGCA TGATCTTTGC TCTTGTCTAC TGTACTGCTG 
    GAATTTCAGG TAACCTTCTC TCGATTTTCC CATTTTTCTG TAATCTCTGT 
    TTTGGTGGGT TCTCTGTTTT TGGGTCTGCT TTATTTGCTC TGTTTTGTTT 
    CTGAAAACCA TTAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 187819 [Map]; Strand: w
      • AT4G00430.1 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: -192; Region: promoter
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: -192; Region: promoter
    Flanking Genome Sequence: GT15212 - 3-prime edge 
    AACGGTAGAG GATTTTACCG ACCGTTACCG ACCGTTTTCA TATTGGTTCA 
    GTTTATTTGA CTCTCAGTTT ATTTGCCTAA GCCTTGAAAT TAGGTGTTAA 
    CTATTCGTTA TACAAGTTGA AACTTGAAAT AAAGAAAAAA CTATAAGTTA 
    TACTATTTTA TTTTCTTAGC AATAACTAAA AATAAATGTT TGGAAACGTT 
    AGGCAATTTT ATTATATTCT ATCGTTGTCC TCTATCAATG AAGTCTCGAC 
    CACACACTAG GTAGCTACAC ACGAGAAAGA AAAAGCTCAC AACTTTAACC 
    TTTCTGGAGA GAGAAGAACA AAAGAGGGAG AGGGAGAGAA ATGGAAGGCA 
    AAGAAGAAGA TGTACGAGTG GGAGCTAACA AGTTCCCGGA GAGGCAACCC 
    ATCGGTACAT CGGCTCAGTC CACCGACAAG GACTACAAAG AGCCACCTCC 
    TGCGCCACTG TTCGAGCCCG GCGAGCTCAG CTCATGGTCT TTCTACAGAG 
    CCGGAATAGC TGAGTTTATC GCTACTTTCT TGGTTCTCTA CATCACTGTT 
    TTGACTGTAA TGGGAGTTAA GAGAGCACCA AACATGTGTG CTTCTGTTGG 
    AA

AT4G00430.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
plasma membrane intrinsic protein 1;4 (PIP1;4); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1); Has 10702 Blast hits to 10683 proteins in 2216 species: Archae - 88; Bacteria - 5147; Metazoa - 1472; Fungi - 442; Plants - 2512; Viruses - 2; Other Eukaryotes - 1039 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00430.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR