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GT15214

CSHL Arabidopsis genetrap mutant lines

Original: GT15214

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15214

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 103889 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: intron3 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT15214 - 3-prime edge 
    AGAGGTTTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA ATGAGAGATA 
    TATCTAATGA AAACAAGTCT GCTTGAATGA ATGTTGCACC TGACCAACGA 
    TGTTGAACCT GAAAAAAGAT TTGTGAAAAT GAGTCAGAGA GAGACGCTCT 
    CTTGCTTCCA ATTCCAAATT AAGAAAAAGG TGAGAGAAGG GAGTACCAGC 
    CAGTCATCCA AGAGGCAAGA GGAGCCCAAC GAGGGCCAGC GAGCATAGCA 
    CTCCAGTAGT AGAGACCACC GGAGGTAGGG TAAGAGGAGC AGATCTCGGC 
    CATAGATAAC CCAACGCACA TTGTGAAGGA GCCGGCCAGG AACCATCCGT 
    AGACCAGAGT GACAGTGCCG CCGAATCTTA AGCCGGTGTT GTAGGTGGTG 
    GTGATACCAG TGAGCACCGA TATGATGGAG AAGGAGATGG CGAAATTGGA 
    GAAGACCCTG AAATCTAACA ATTGTTTAGC TAACACAAAT CAAAGAAGAA 
    AAAGGAAAGA GTGGCGGAGA CAGACGAGAG ATCGCGCTTG AGCTCTTGCT 
    TGTAGCCGAG CTCCTTGAGG CGGACTTGGC CGGAATCCAT GACGGGAATA 
    AAGGATTGAT CGCCGCCCAA TCCCATAGTC TTCCTGGCCT GAGAGTCCAA 
    AGCTTTGGTT GTTGAGAGCT CTCTCTCTGA TTC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 103904 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: intron3 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT15214 - 3-prime edge 
    ACGTTACCGA CCGTTTTCAT CCCTAATGAG AGATATATCT AATGAAAACA 
    AGTCTGCTTG AATGAATGTT GCACCTGACC AACGATGTTG AACCTGAAAA 
    AAGATTTGTG AAAATGAGTC AGAGAGAGAC GCTCTCTTGC TTCCAATTCC 
    AAATTAAGAA AAAGGTGAGA GAAGGGAGTA CCAGCCAGTC ATCCAAGAGG 
    CAAGAGGAGC CCAACGAGGG CCAGCGAGCA TAGCACTCCA GTAGTAGAGA 
    CCACCGGAGG TAGGGTAAGA GGAGCAGATC TCGGCCATAG ATAACCCAAC 
    GCACATTGTG AAGGAGCCGG CCAGGAACCA TCCGTAGACC AGAGTGACAG 
    TGCCGCCGAA TCTTAAGCCG GTGTTGTAGG TGGTGGTGAT ACCAGTGAGC 
    ACCGATATGA TGGAGAAGGA GATGGCGAAA TTGGAGAAGA CCCTGAAATC 
    TAACAATTGT TTAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 103827 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon4 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15214 - 5-prime edge 
    CCTACTTTCT CCCTGTCTCT ATTGGGGCTA AAGTAAGGTT GTGGTGTGTT 
    TGCAGTGGGC AGTGACGGCC AGCGTTGACT TCTCTCTGGC ACAGTTGATT 
    CAGGTGATCG TCCTTCTCTC CACCGGCGGT AGAAACGGCG GCGGTTATAA 
    AGGATCAGAC TTTGTTGTGA TTGGTATCCA TGGTGGGATC CTCTTCATCC 
    ACGCTCTTCT CAACAGCCTC CCCATCTCCG TCTTGTCTTT CATTGGACAG 
    CTTGCTGCTC TTTGGAATCT CCTCGGTACC CAATCTCTCT TTTGTCTCTG 
    TG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 103827 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon4 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT15214 - 5-prime edge 
    CCTACTTTCT CCCTGTCTCT ATTGGGGCTA AAGTAAGGTT GTGGTGTGTT 
    TGCAGTGGGC AGTGACGGCC AGCGTTGACT TCTCTCTGGC ACAGTTGATT 
    CAGGTGATCG TCCTTCTCTC CACCGGCGGT AGAAACGGCG GCGGTTATAA 
    AGGATCAGAC TTTGTTGTGA TTGGTATCCA TGGTGGGATC CTCTTCATCC 
    ACGCTCTTCT CAACAGCCTC CCCATCTCCG TCTTGTCTTT CATTGGACAG 
    CTTGCTGCTC TTTGGAATCT CCTCGGTACC CAATCTCTCT TTTGTCTCTG

AT2G01170.1

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 15465 Blast hits to 15422 proteins in 1894 species: Archae - 296; Bacteria - 11987; Metazoa - 438; Fungi - 2169; Plants - 254; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01170.2

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR