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GT15219

CSHL Arabidopsis genetrap mutant lines

Original: GT15219

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15219

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1157273 [Map]; Strand: w
      • AT4G02650.1 - [+] show detail - ENTH/ANTH/VHS superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT15219 - 5-prime edge 
    CCTACTTTCT CCCGTGGCAC AGGTAATAAT TAATTTCCTT GGAACACACG 
    TTTTTCCACT TTCGGATTTC TTGGTTAATA AGTTAGGTCT TTTGCAACAG 
    GTAATGCGAA GAACAACAGA GTGGTGATTG TGGCTATGTA TCCGATAGTA 
    AAAGAGAGTT TTCAGTTATA CTACAACATA ACAGAGATCA TGGGAGTATT 
    AATAGAGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1157267 [Map]; Strand: w
      • AT4G02650.1 - [+] show detail - ENTH/ANTH/VHS superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT15219 - 5-prime edge 
    TCCCATCCTA CTTTCTCCCG TGGCACAGGT AATAATTAAT TTCCTTGGAA 
    CACACGTTTT TCCACTTTCG GATTTCTTGG TTAATAAGTT AGGTCTTTTG 
    CAACAGGGAA TGCGAAGAAC AACAGAGTGG TGATTGTGGC TATGTATCCG 
    ATAGTAGAAC AGAGTTTTCA GTTATACTAC AACATAACAA AGATCATGGG 
    AGTATTAATA GAGCGATTCA TGGAATTAGA CATTCATGAT TCCCTCAAAG 
    TCTATGAAAT CTTCTGTCGA GTTTCTAAAC AGTTTGACGA GTTAGATCCG 
    TTTTACGGAT GGTGTAAGAA CATGGGAGTT GCAACATCTT CACAGTATCC 
    AAAATTGGAA AACATTACAC AGAAGAAACT TGATCTCATG GATGAGTTTA 
    TAAGAGATAA ATCAGCTTTA GCTGCACAAA CAACAAAATC ATCATCAAAA 
    AAGTCTAACA AATCTCGAGG AGGAGGAGA

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT15219 - 5-prime edge 
    CATCCTACTT TCATCCCGAG GCAACAGGTA ATAATTAATT TCCCTTGGAA 
    CACACGTATT TTCCAC

AT4G02650.1

Model type
Protein coding
Short Description
ENTH/ANTH/VHS superfamily protein
Computational Description
ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G03050.1); Has 1450 Blast hits to 1384 proteins in 224 species: Archae - 6; Bacteria - 69; Metazoa - 513; Fungi - 180; Plants - 407; Viruses - 6; Other Eukaryotes - 269 (source: NCBI BLink).
Link
InterPro Scan - TAIR