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GT15223

CSHL Arabidopsis genetrap mutant lines

Original: GT15223

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT15223

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7075952 [Map]; Strand: w
      • AT4G11745.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15223 - 3-prime edge 
    ATGAAACGGT AGAGGTTTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    GCTGAGATTG CGCTTGAAAG ACGCAATGCA CAAGAGATTT ATGGGAAAAT 
    TGAGTGGTGT AATGTTGTGC TTACATTGCC CAGTTCATGT TCTATTGATG 
    AGTTAAATGC TGTCAGTATC ATTGTCTGAT GAATGAACAG ATTATATTAA 
    ATATCAATTT GCTTTCAATT CGATTAAATG AATTCTTTTT TTTCTTTCCT 
    TTTTGTGGTT AAATATGATT AAGGTTTCCT ATGTAATGCC TCTGTGAGAC 
    TGTAACAAAG CTTCTTCTTT CACAAAAAAA AAACCCCAAA CTTTGAAAAG 
    TTGTTTTAAC CCCCCCCCCC GGGGAAAAAA ACCTTCCTAA ACCACCCGGG 
    GGAAATCTTT GTTAAAAACA AATTGGGACC TTTTTAAAGG GGAGGGGGGT 
    TGTTTTCCCC TTTAATTCCC AAAAGTTTGG TTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7075950 [Map]; Strand: w
      • AT4G11745.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15223 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGC 
    TGAGATTGCG CTTGAAAGAC GCAATGCACA AGAGATTTAT GGGAAAATTG 
    AGTGGTGTAA TGTTGTGCTT ACATTGCCCA GTTCATGTTC TATTGATGAG 
    TTAAATGCTG TCAGTATCAT TGTCTGATGA ATGAACAGAT TATATTAAAT 
    ATCAATTTGC TTTCAATTCG ATTAAATGAA TTCTTTTTTT TCTTTCCTTT 
    TTGTGGTTAA ATATGATTAA GGTTTCCTAT GTAATGCCTC TGTGAGACTG 
    TAACAAAGCT TCTTCATTCA CAAAAAAAAA ACACCAAACT TGGACCAGTT 
    GTTTTGACTC CCCTCCCCGG GGAAAAAAAC CTTCCCAAAT CACTCGGGGG 
    AAACCTTTGT TAAAAACAAA TTGGGGACTC TTTAAAGGGG AAGGGGGTTG 
    TTTACCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7076003 [Map]; Strand: w
      • AT4G11745.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15223 - 5-prime edge 
    CCTACTTTCT CCCTGATCTC AGCACACCAA ATGGTAATCT TGTTATAGCC 
    GATAAGAGGA CGCACTTCCT TCTCCCAAAA AATCGCGACC TTTCCACCAT 
    AATCCACCAA TCTAACATGA CGACTAACTA ACACTCGAGG TAATTTCGGT 
    AGTAGTTCTT CCAAACCATT CAAAATTCCC CACGAGCTTC CTTCAGGGTC 
    ATACCATTCG AGCAACCTGG AATGTCTATT GTAATAGTAG ATGATTACCT 
    TATCTATCAC GCAAAAAGAA TCATGGGGAA TCCAATGGAA ATTCAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7076001 [Map]; Strand: w
      • AT4G11745.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT15223 - 5-prime edge 
    ATCCTACTTT CTCCCTGATC TCAGCACACC AAATGGTAAT CTTGTTATAG 
    CCGATAAGAG GACGCACTTC CTTCTCCCAA AAAATCGCGA CCTTTCCACC 
    ATAATCCACC AATCTAACAT GACGACTAAC TAACACTCGA GGTAATTTCG 
    GTAGTAGTTC TTCCAAACCA TTCAAAATTC CCCACGAGCT TCCTTCAGGG 
    TCATACCATT CGAGCAACCT GGAATGTCTA TTGTAATAGT AGATGATTAC 
    CTTATCTATC ACGCAAAAAG AATCATGGGG AATCCAATGG AAATTC

AT4G11745.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G11770.1); Has 1087 Blast hits to 1039 proteins in 91 species: Archae - 4; Bacteria - 51; Metazoa - 373; Fungi - 2; Plants - 634; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Link
InterPro Scan - TAIR