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GT15239

CSHL Arabidopsis genetrap mutant lines

Original: GT15239

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT15239

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1274592 [Map]; Strand: c
      • AT4G02880.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT4G02880.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT15239 - 5-prime edge 
    CTTTCTCCCT GATTGGAAGA AGAAAGAAGA TTTAGATCAG ACGAACCTTC 
    CCAAGATTTT TCCGGTTGAG AGATTTGACA GAGCAAAAGG AAGCGGAAAA 
    GGCGCAATTC GGATGAGAGA TTTTTGAGAA TTGTGAGAAA CAACAGTAAA 
    TTAAATGGTT TGTTTCTCGG AGAAGAAGAA AAATAATATC AGACGAAACT 
    TACGCGGCTA AGAAACAAAA GGGTAATTTC GGTAATTTAA TAGAACCCTC 
    AAAGTCAATG AGTTTTAGAC CGATGTGGAT AACTATTGGC GTAGGCCCAG 
    CGTGTCTTAA AGGCCATTTT GATCGTGTTG AAATATTAGG GTTTAAGGTA 
    GAGAATAAAT AATGCTGGCC CAATAGAATA GTAAAAATAC TTCTAATTTG 
    AGCCCATATT ATTCTGGCCC ATAGTATTTC TACGTCCACT GTCCAGCTAC 
    TCTATATACC TTGTTGCAGA AGCCATACGA CACAGAGCAT TGGCATTGCC 
    TTC

AT4G02880.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03290.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G02880.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03290.2).
Link
InterPro Scan - TAIR