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Mutant Lines
GT15254

GT15254

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT15254

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 4436860 [Map]; Strand: w
  - AT3G13590.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: GT15254 - 3-prime edge
```
TATTTTACCG CACCGTTACC GACCGGTTTT CATCCCTAAA GATATCCTCG 
GTCTTTGTTG TACTTGTACC TAAAGAAGGA GAATAACAAT ATATCTATTT 
ATACGATTAT AGTCCTTACA AAATCACATC ACCATAATGT ATTTCCCATC 
TGATCACGCT AGAC
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 4436869 [Map]; Strand: w
- AT3G13590.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: intron1 (CDS)

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAAAG 
ATATCCTCGG CTTTGTTGGA CTTGTACCTA ATGAAGGAGA ATAACAATAT 
ATCTATTTAT ACGATTATAG TCCTTACAAA ATCACATCAC CATAATGTAT 
TTCCCATCTG AGCACGCTAG ACACATATTT GAAGAATCTC CACGCGATTC 
TAGAGATGCA ATTTGCAAAT TGTGGAAAAT TACGGTCNCT TTTTTGAATC 
ATTCGCATAT TATTGTCGTG AATGTAGATC CCATTTCCAT AAGGATTGTC 
TCACAATAAT CAATGCAAAG ATTCATGAGC ATACACTAAC TTTCATTCGT 
AGAGAGAATC CGTTCCCTTG TGATGTTTGT GGGAGGGATG ATAAAGGTAT 
GGATATGTAC GGATGTTTAC AATGCGATTT CTTTGTACAT AGACAGTGTA 
TATTCCTACC AAAGGTTATA AAGCTCACAC GTCACTCACA GCGTCTCTCT

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 5708890 [Map]; Strand: w
  - AT2G13690.1 - [+] show detail - PRLI-interacting factor, putative
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT15254 - 5-prime edge
```
CACCATGATC GTCGGCGAGA AAAATGTCCG GTGCCGAAAT TGGTAGGTTT 
ACGGAGGTCA GAGTCGCCCA TTGTCATCAA GTGAGAGCTG GGGAAGTGAG 
TAAAGTTGTA GTCTAGAGAG ATGACTGTTT TG
```

AT2G13690.1

Model type: Protein coding
Short Description: PRLI-interacting factor, putative
Computational Description: PRLI-interacting factor, putative; BEST Arabidopsis thaliana protein match is: BTB/POZ domain-containing protein (TAIR:AT5G60050.1); Has 259 Blast hits to 259 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G13590.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G42280.1); Has 1359 Blast hits to 591 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1347; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link: InterPro Scan - TAIR